Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2614 141 2e-28 seq2600 134 3e-26 seq1352 120 7e-22 seq2553 118 3e-21 seq2841 116 9e-21 seq3863 113 1e-19 >seq2614 Length=127402 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| || || || ||||| || ||| | || || ||| || || Sbjct 58960 CAGATTTTCGTCAAAACCCTTACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCTGAT 59019 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || ||||||||||| ||||||||||| ||||| ||||| || ||||| || |||||| Sbjct 59020 AGTATTGAGAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAGCAA 59079 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || |||||||||||||| | ||| | ||||| ||| | Sbjct 59080 CGTTTGATCTTTGCTGGTAAGCAGCTCGAAGATGGTCGTACTTTGAGTGATTACAACATT 59139 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || || || |||| || Sbjct 59140 CAAAAGGAATCCACTCTCCA-CTTGGTT 59166 Score = 132 bits (146), Expect = 1e-25 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || |||||||| || ||||| | || || ||| || || Sbjct 58732 CAAATCTTTGTAAAGACCCTTACAGGAAAGACTATCACTTTAGAAGTCGAATCTTCTGAT 58791 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | |||||| || || || |||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct 58792 AGCATCGAAAATGTAAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAA 58851 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || ||||| ||||||||||| | || ||| | || || ||| | Sbjct 58852 CGTCTCATTTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTTTCAGACTACAACATT 58911 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || || || |||| || Sbjct 58912 CAAAAGGAATCCACTCTCCA-CTTGGTT 58938 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| || || || ||||| ||||| | || || || || || Sbjct 59188 CAGATTTTCGTCAAAACCCTTACTGGTAAAACCATCACTTTAGAAGTTGAGTCTTCTGAT 59247 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || || || || || ||||||||||| ||||| ||||| || ||||| ||||| ||| Sbjct 59248 AGTATTGAAAATGTAAAGCAAAAGATTCAAGACAAGGAAGGGATTCCTCCTGACCAACAA 59307 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| | |||||||| | || ||| | || || ||| | Sbjct 59308 CGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAACATT 59367 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||| || || || |||| Sbjct 59368 CAAAAAGAATCCACTCTTCA-CTTG 59391 >seq2600 Length=207564 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| ||||| ||||| ||||| | || || ||| || || Sbjct 124299 CAAATATTTGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCCGAT 124358 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || ||||| ||||||||||| || || || || || ||| Sbjct 124359 ACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAACAA 124418 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| || || ||||| || |||||||| | || | ||||||||| | Sbjct 124419 AGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAATATA 124478 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| ||||||||||| ||| | || || Sbjct 124479 CAAAAGGAATCAACACTCCATTTGGTATT 124507 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || || || || ||||| ||||| | || || ||| || || Sbjct 124071 CAAATTTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCTGAT 124130 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||||| ||||| || ||||||||||| || || ||||| || ||||| || || ||| Sbjct 124131 AGTATCGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGTATTCCTCCTGATCAACAA 124190 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || ||||| | |||||||| | ||||| || ||||| | Sbjct 124191 CGTCTCATCTTTGCTGGCAAACAATTAGAAGATGGTCGTACTCTCAGTGACTATAATATT 124250 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| |||||||| || ||| Sbjct 124251 CAAAAGGAATCAACTCTTCAT 124271 >seq1352 Length=65141 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || || ||||| ||||| | || || || || || Sbjct 15519 CAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCTGAT 15460 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || ||||| ||||| ||||||||||| ||||| || || || ||||| || || || Sbjct 15459 AGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAACAG 15400 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||||| |||||||| | || ||| | || |||||| | Sbjct 15399 CGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAACATT 15340 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || || || |||| || Sbjct 15339 CAAAAGGAATCTACTCTCCA-CTTGGTT 15313 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || || ||||| ||||| | || || || || || Sbjct 15975 CAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCTGAT 15916 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || ||||| ||||| ||||||||||| ||||| || || || ||||| || || || Sbjct 15915 AGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAACAG 15856 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||||| |||||||| | || ||| | || |||||| | Sbjct 15855 CGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAACATT 15796 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || || || |||| || Sbjct 15795 CAAAAGGAATCTACTCTCCA-CTTGGTT 15769 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || ||||| | || || || || || Sbjct 15747 CAAATTTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTCGAGTCTTCTGAT 15688 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||| ||||| ||||| ||||||||||| || || || || || ||||| || |||||| Sbjct 15687 AGCATTGAGAATGTCAAGCAAAAGATTCAAGATAAGGAGGGCATTCCTCCTGATCAGCAA 15628 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || ||||| | ||||| || | ||| | || || ||| || Sbjct 15627 CGTCTCATTTTCGCTGGTAAACAATTGGAAGACGGTCGCACTTTGAGTGACTACAACATC 15568 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || || || |||| || Sbjct 15567 CAAAAGGAATCCACTCTCCA-CTTGGTT 15541 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || ||||| | || || || || || Sbjct 16203 CAAATTTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTCGAGTCTTCTGAT 16144 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||| ||||| ||||| ||||||||||| || || || || || ||||| || |||||| Sbjct 16143 AGCATTGAGAATGTCAAGCAAAAGATTCAAGATAAGGAGGGCATTCCTCCTGATCAGCAA 16084 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || ||||| | ||||| || | ||| | || || ||| || Sbjct 16083 CGTCTCATTTTCGCTGGTAAACAATTGGAAGACGGTCGCACTTTGAGTGACTACAACATC 16024 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || || || |||| || Sbjct 16023 CAAAAGGAATCCACTCTCCA-CTTGGTT 15997 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || |||||||| || || || || || | || || || || || Sbjct 15291 CAAATTTTCGTCAAGACTCTCACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCTGAT 15232 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||| ||||| ||||| ||||||||||| || || || ||||| ||||| || || || Sbjct 15231 AGCATTGAGAATGTCAAGCAAAAGATTCAAGATAAGGAGGGAATTCCTCCTGATCAACAG 15172 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| | ||||| || | ||| | || || || | Sbjct 15171 CGTTTGATCTTTGCTGGTAAACAATTGGAAGACGGTCGTACTTTGAGTGACTACAATATT 15112 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || || || |||| || Sbjct 15111 CAAAAGGAATCCACCCTTCA-CTTGGTT 15085 >seq2553 Length=14598 Score = 118 bits (130), Expect = 3e-21 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||||| |||||||| || || ||||| ||||||||||| ||||| ||||| || ||||| Sbjct 8049 AGCTCTGACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 8108 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||||| || || |||||||| ||||| | ||||| || | ||| | ||| Sbjct 8109 GACCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTTTGAGCGAC 8168 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||| | ||||| ||||| || || || |||| || Sbjct 8169 TACAACATTCAAAAGGAATCCACCCTTCA-CTTGGTT 8204 >seq2841 Length=27215 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| ||||| || || ||||| | || || ||| ||| || Sbjct 25655 CAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCCGAT 25596 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| || ||||| || |||||||| ||||| || || || ||| Sbjct 25595 ACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAACAA 25536 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || ||||| || ||||| || | || | ||||| || | Sbjct 25535 AGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAATATA 25476 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 |||||||||||||| || ||| | || || Sbjct 25475 CAAAAAGAATCAACGCTTCATTTGGTATT 25447 Score = 113 bits (124), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| ||||| || || ||||| | || || ||| ||| || Sbjct 25889 CAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCCGAT 25830 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| || ||||| || |||||||| ||||| || || || ||| Sbjct 25829 ACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAACAA 25770 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || ||||| || ||||| || | || | ||||| || | Sbjct 25769 AGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAATATA 25710 Query 178104 CAAAAAGAATCAACACTGCA 178123 |||||||||||||| || || Sbjct 25709 CAAAAAGAATCAACGCTTCA 25690 Score = 113 bits (124), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| ||||| || || ||||| | || || ||| ||| || Sbjct 26123 CAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCCGAT 26064 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| || ||||| || |||||||| ||||| || || || ||| Sbjct 26063 ACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAACAA 26004 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || ||||| || ||||| || | || | ||||| || | Sbjct 26003 AGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAATATA 25944 Query 178104 CAAAAAGAATCAACACTGCA 178123 |||||||||||||| || || Sbjct 25943 CAAAAAGAATCAACGCTTCA 25924 >seq3863 Length=144211 Score = 113 bits (124), Expect = 1e-19 Identities = 122/158 (77%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||||| |||||||| || || ||||| ||||||||||| ||||| ||||| || ||||| Sbjct 120122 AGCTCTGACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 120063 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGA 178093 || || ||||| || || |||||||| ||||| | |||||||| | || |||| || Sbjct 120062 GATCAACAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGCAC-CTTGAGTGA 120004 Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||| | ||||| ||||| || || || |||| || Sbjct 120003 CTACAACATTCAAAAGGAATCTACTCTTCA-CTTGGTT 119967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203660779467804