Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2855 107 4e-18 >seq2855 Length=12074 Score = 107 bits (118), Expect = 4e-18 Identities = 277/417 (66%), Gaps = 10/417 (2%) Strand=Plus/Minus Query 101820 TCTTGTTTAACGCTGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTATTA 101879 |||| | || || | |||| || ||||| ||| ||||| |||| | ||||| || Sbjct 5458 TCTTACTCAATGCCGTACAAAACATCCCCTGCATAAAGAAAAAGGCTAACTGGGCCCTTG 5399 Query 101880 ATTGGATGCAAAGCAATA----ACGATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTT 101935 | ||||| | | || | | ||||| | || | | | ||| ||| || || Sbjct 5398 AATGGATTGATGACTCTAGAAAAAGCTTTGGTGAAAG-ATTGGCTGCTTTTTGTGTCGTA 5340 Query 101936 GAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATT 101995 ||||| || ||||| ||||| | ||||| |||| |||||| |||| || | || || Sbjct 5339 GAAGGCATATTCTTCAGTGGCTCCTTCGCCGCCATCTTCTGGCTCAAAAAGCGTGGCCTT 5280 Query 101996 TTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGAC 102055 |||| ||||| || | ||| || || | || | ||| || ||||||||||| ||| Sbjct 5279 ATGCCCGGTCTTACTTTCTCAAACGAACTTATCTGTAGAGATGAAGGTCTTCACACCGAT 5220 Query 102056 TTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTT 102115 || | ||| | |||| ||| | | || | | || || ||||| ||| | Sbjct 5219 TTCGGCTGCCTATTGTTCAAATA---CCTCGTCAACAAACCTTCTGAAGAAACGATATTA 5163 Query 102116 GAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGT- 102174 | ||||| |||| ||||| || ||||||||||| | || | || | ||||| Sbjct 5162 GCCATTGTTGCTGACGCCGTTACCATAGAACAAGAATTCTTAACTGACTCATTACCTGTC 5103 Query 102175 TAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGA 102231 | ||| | |||||||| ||||| | ||| |||||||||||||||||| || || Sbjct 5102 TCTCTTA-TAGGAATGAATAGCAAGCTAATGTCCCAGTACATTGAATTTGTTGCTGA 5047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989506188700835