Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4232 132 3e-26 >seq4232 Length=1601 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||||||||| | ||| | ||||||||||||||| || ||||| || ||||||||||| Sbjct 738 ACCACCTCTAAGACGAAGCACCAAATGAAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 679 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| ||| |||| || | |||||| |||||||| || || ||||| || || | || Sbjct 678 CAAAGTACGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGTGG 619 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||| ||||| ||| || ||||| || || | | ||| || | ||| || Sbjct 618 GATTCCTTCCTTGTCTTGAATCTTCTGCTTGACGTTGTCAATAGTGTCGGAAGATTCGAC 559 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| | ||||| || || || || | || || ||||| || ||||| Sbjct 558 TTCAAGGGTAATGGTCTTGCCTGTTAGAGTCTTAACGAAGATTTGCAT 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334922147728847