Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq23 96.9 6e-15 >seq23 Length=21893 Score = 96.9 bits (106), Expect = 6e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 203870 GCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATG 203929 |||||| || |||| || ||||||||||| ||||| | || |||| ||| || || | | Sbjct 3449 GCAGGCTTGGTTCTGAGGTAGTACATGCCTGTCTTCAATCCTTTCTTCCAGCCATAAAAG 3508 Query 203930 TGCATGGAAGACAG--TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGC 203987 ||||| |||| || |||| | | || |||| | |||||||||| || || || |||| Sbjct 3509 TGCATCGAAGTGAGTTTTTGGTAA--TTTGGGTTGTCCATGTGAATATTGAGGGATTGGC 3566 Query 203988 TTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCT 204047 |||| |||||| ||| | || ||||| | | || || || | ||| ||| ||| | Sbjct 3567 TTTGATCGATGTAAGCTCCGCGGTCTGCAGAAAGATCTATGATAGACTTTTGCTTAATTT 3626 Query 204048 CCCACACCGTCTTG 204061 | | || || ||| Sbjct 3627 CATAAACAGTTTTG 3640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795094201656720