Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq23 223 4e-53 seq6030 91.5 2e-13 seq3781 91.5 2e-13 seq2380 91.5 2e-13 seq1707 91.5 2e-13 seq4740 89.7 6e-13 seq1773 89.7 6e-13 seq1284 89.7 6e-13 seq1079 89.7 6e-13 seq662 89.7 6e-13 seq279 89.7 6e-13 seq26 89.7 6e-13 >seq23 Length=21893 Score = 223 bits (246), Expect = 4e-53 Identities = 631/956 (66%), Gaps = 30/956 (3%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 ||||| ||||| || || || ||||| |||| | ||||| ||| |||||| || | Sbjct 4454 GGGAGGGCAATGGAGGCTAGGTTGCATACAGCAACTTCGTCCTTGGAGGTGTACTCAACG 4513 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 ||||| || || | ||| || || ||||| || | ||| | || || ||||| | Sbjct 4514 ATTTCAGTGCATAGGTTTGAGCTTTTAATTGTTCCGAGGTTTTGTTGGTTAGATTTACCG 4573 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 || || || || || |||||||||||||| ||||||||||| |||| || | | || Sbjct 4574 TTACACGCGTCTTTGTAGAGCATGTATGGAGTACCAGTTTCGATCTGGGAATCTAAGATA 4633 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGAG----ACCTTCC---TCC 110511 || | ||| | | || ||| |||| |||||| ||||| |||||| | Sbjct 4634 GCGTACCAGAGTT-----GCTGGG-CAGTGATGCGTTTGCGAGGAAGACCTTCAGTGTTT 4687 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 |||||||| ||| | || || || | | || | || |||| ||||| || Sbjct 4688 TCGTACTTTAGGTAGAGCTCATCGAACTTTTCACCCCAAACGTCAGCTAGACCAGGAGCT 4747 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | | || ||||| | ||||| | || ||| ||| | |||||| |||||| Sbjct 4748 TCATGAGGGCAGAATAATGACCAGTCGCCGTTTTCCAAAACGCGGCGCATGAAAAGGTCA 4807 Query 110632 GGAATCCACATCGCCG-AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAG 110690 |||||||| | |||| |||| | ||||||| ||| ||||| | ||| || || Sbjct 4808 GGAATCCA-AAGGCCGTAGAACAAGTCACGGGCGCGATTTTCTTCTTTACCGTGATTTTT 4866 Query 110691 GCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGA 110750 | | | ||||| || | || || || ||||||||||| ||||| | |||| || Sbjct 4867 TCTCAAGTTTAAAAATTCAAAAATGTCAGAATGCCATGGTTCAAGATAAATGGCGAAGGC 4926 Query 110751 TCCCTTACG--ACGACCCGCC-TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAG 110807 || ||| ||||| || | || || || || || | ||||| || ||| Sbjct 4927 GCCTGGACGTTTGTTGCCGCCTTGATCGACGTATCGAGCGGTTGTGTTGAATACTTGGAG 4986 Query 110808 CATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACG 110867 ||| |||| ||||| | ||| ||| || || || ||| ||| | | || || Sbjct 4987 CATTGGAACGATTCCGTTGGAGGTACCGTTAGTTCCAGCAATGTAGGAGCCAGTTGCGCG 5046 Query 110868 AATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGT 110927 || | |||||| | || || ||||| || | || ||||| ||||||| | Sbjct 5047 GATATTGTGGATGCTGAGGCCGATTCCACCAGCAGATTTGGAAATTTTAGCACACTGGGA 5106 Query 110928 GAGTGTACCATAAATACCATCAATCGAATC----TGCCTTGTTGGCAATTAGAAAGCAAG 110983 || ||| |||||||||| || || || || ||| ||||| ||| ||||| || | Sbjct 5107 GATAGTATCATAAATACCTTCGATAGAGTCATCTTGCATTGTTAGCA---AGAAA-CAGG 5162 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043 | | |||||| ||| ||||| | ||||| || ||||| | |||||| | || | Sbjct 5163 AGCTTAGCTGAGGGCGATTAGTTCCAGAGTTGAAAAGGGTAGGAGAGGCATGAGTAAAAA 5222 Query 111044 GACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATAC 111103 | ||||||||| || ||| || | || ||||| | ||||||| ||| || |||| Sbjct 5223 AGCGTTGGGACATGAGGTGGTAAGTTTTGATGGCGGATTGGACATCTTCACCATGGATAC 5282 Query 111104 CAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCT 111163 |||| || ||||||| | |||||||| |||| || | || |||||||| Sbjct 5283 CAATACTGACGCGCATGAGAAGGTATTGAGGTCTTTCAATGATTTTACCATCAACTTTGA 5342 Query 111164 GAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACG 111218 |||||||| |||| || ||||| |||| ||||||||| | |||| ||||| || Sbjct 5343 GAAGGTAAGATCTT-TCGAGGGTTTTGAAACCAAAGTAGTTATAATCAAAATCGCG 5397 >seq6030 Length=25879 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 168439 AGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACAGCGAGAGTT 168498 || || || || ||| ||| |||||||| | ||| | ||||| | |||||||||| Sbjct 15780 AGCGGGAAGACACCAAAATAGTCTCTACCAATTACGCTTAAACCAGAAATAGCGAGAGTT 15721 Query 168499 TTCGCTGAATCACCCTCTGTCACGATGAGTGTACA--CTTTCCAGACTGTGCCGTACCAG 168556 || || || || || ||||| | |||||| ||||| |||| || | || ||||| | Sbjct 15720 TTAGCAGAGTCTCCTTCTGTTAAGATGAGGGTACAATCTTTTGAGCGTTTG--GTACCGG 15663 Query 168557 CTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGATCTTAGACTTTCGAGCTCCATCAG 168616 ||| || || || || | || ||||| ||||| |||| | || ||| |||| Sbjct 15662 CTTGATTTGCGTCTTCAAGCTTAACAATACCGGTGATTCTAGATGATTTAGTTCCGTCAG 15603 Query 168617 TCTTTTTGAGTTCTTTCATCTCTTTGAATTT 168647 | |||||||| ||| ||| |||||| |||| Sbjct 15602 TTTTTTTGAGGCCTTGCATTTCTTTGTATTT 15572 >seq3781 Length=11772 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 168439 AGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACAGCGAGAGTT 168498 || || || || ||| ||| |||||||| | ||| | ||||| | |||||||||| Sbjct 10138 AGCGGGAAGACACCAAAATAGTCTCTACCAATTACGCTTAAACCAGAAATAGCGAGAGTT 10197 Query 168499 TTCGCTGAATCACCCTCTGTCACGATGAGTGTACA--CTTTCCAGACTGTGCCGTACCAG 168556 || || || || || ||||| | |||||| ||||| |||| || | || ||||| | Sbjct 10198 TTAGCAGAGTCTCCTTCTGTTAAGATGAGGGTACAATCTTTTGAGCGTTTG--GTACCGG 10255 Query 168557 CTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGATCTTAGACTTTCGAGCTCCATCAG 168616 ||| || || || || | || ||||| ||||| |||| | || ||| |||| Sbjct 10256 CTTGATTTGCGTCTTCAAGCTTAACAATACCGGTGATTCTAGATGATTTAGTTCCGTCAG 10315 Query 168617 TCTTTTTGAGTTCTTTCATCTCTTTGAATTT 168647 | |||||||| ||| ||| |||||| |||| Sbjct 10316 TTTTTTTGAGGCCTTGCATTTCTTTGTATTT 10346 >seq2380 Length=16355 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 9027 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 9086 Query 136777 GGGAACAG 136784 | || ||| Sbjct 9087 GTGAGCAG 9094 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 16075 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 16016 Query 136777 GGGAACAG 136784 | || ||| Sbjct 16015 GTGAGCAG 16008 >seq1707 Length=24347 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 3471 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 3412 Query 136777 GGGAACAG 136784 | || ||| Sbjct 3411 GTGAGCAG 3404 >seq4740 Length=4854 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 1199 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 1140 Query 136777 GGGAACA 136783 | || || Sbjct 1139 GTGAGCA 1133 >seq1773 Length=4799 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 2483 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 2424 Query 136777 GGGAACA 136783 | || || Sbjct 2423 GTGAGCA 2417 >seq1284 Length=4901 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 439 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 498 Query 136777 GGGAACA 136783 | || || Sbjct 499 GTGAGCA 505 >seq1079 Length=8535 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 2246 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 2187 Query 136777 GGGAACA 136783 | || || Sbjct 2186 GTGAGCA 2180 >seq662 Length=14035 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 4952 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 4893 Query 136777 GGGAACA 136783 | || || Sbjct 4892 GTGAGCA 4886 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 11603 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 11662 Query 136777 GGGAACA 136783 | || || Sbjct 11663 GTGAGCA 11669 >seq279 Length=15527 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 13131 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 13190 Query 136777 GGGAACA 136783 | || || Sbjct 13191 GTGAGCA 13197 >seq26 Length=24457 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 19841 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 19782 Query 136777 GGGAACA 136783 | || || Sbjct 19781 GTGAGCA 19775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588930818178600