Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2855 86.0 1e-11 >seq2855 Length=12074 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/177 (72%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 25900 GTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGG 25959 || || ||||| || ||||| || || || || ||||||||||||||||| || || Sbjct 5342 GTAGAAGGCATATTCTTCAGTGGCTCCTTCGCCGCCATCTTCTGGCTCAAAAAGCGTGGC 5283 Query 25960 ACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAG 26018 |||||||| || |||||| || ||||| || ||| | || || || ||||| |||| Sbjct 5282 CTTATGCCCGGTCT-TACTTTCTCAAACGAACTTATCTGTAGAGATGAAGGTCTTCACAC 5224 Query 26019 AGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGAC 26075 ||||| | |||||| | | || || | || ||||||||||| |||| || Sbjct 5223 CGATTTCGGCTGCCTATTGTTCA---AATACCTCGTCAACAAACCTTCTGAAGAAAC 5170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928773545993280