Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6033 107 2e-17 seq605 107 2e-17 >seq6033 Length=19533 Score = 107 bits (118), Expect = 2e-17 Identities = 184/264 (70%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 ||| | |||||||| || |||||| || || ||||| |||| || ||||| || | Sbjct 4180 GAGTCAGTGCTCGAGCTTAACGCGAGTGATGATCGCGGTATCGAGGTTGTGCGGAACAAG 4239 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGC---CGCCCGGACGC-CACAAGGTGAT 1574083 ||||||| || |||| | | || | || |||| | |||||| |||| Sbjct 4240 ATCAAGCTGTTTGCGCAGAAGAAGCT-GAGTTTTATGCGTCCGGGCATGCACAAGCTGAT 4298 Query 1574084 CATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCAT 1574143 || ||||||||||| ||| | | || ||| || ||||| |||||||| || ||| Sbjct 4299 AATACTCGACGAGGCGGACAGTATGACAACGGGTGCGCAGCAAGCCCTGCGCCGCATCAT 4358 Query 1574144 GGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCAT 1574203 ||| | ||| |||||||||||| ||||| | |||||||| |||||| | | |||| Sbjct 4359 GGAGATATACAGCAACACGACGCGGTTTGCAATTGCGTGCAATTTGTCGTCAAAGATCAT 4418 Query 1574204 CGAGGCCCTCCAAAGTCGCTGCGC 1574227 |||| | |||| ||| | ||||| Sbjct 4419 CGAGCCGATCCAGAGTAGGTGCGC 4442 >seq605 Length=39468 Score = 107 bits (118), Expect = 2e-17 Identities = 184/264 (70%), Gaps = 5/264 (2%) Strand=Plus/Minus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 ||| | |||||||| || |||||| || || ||||| |||| || ||||| || | Sbjct 35289 GAGTCAGTGCTCGAGCTTAACGCGAGTGATGATCGCGGTATCGAGGTTGTGCGGAACAAG 35230 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGC---CGCCCGGACGC-CACAAGGTGAT 1574083 ||||||| || |||| | | || | || |||| | |||||| |||| Sbjct 35229 ATCAAGCTGTTTGCGCAGAAGAAGCT-GAGTTTTATGCGTCCGGGCATGCACAAGCTGAT 35171 Query 1574084 CATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCAT 1574143 || ||||||||||| ||| | | || ||| || ||||| |||||||| || ||| Sbjct 35170 AATACTCGACGAGGCGGACAGTATGACAACGGGTGCGCAGCAAGCCCTGCGCCGCATCAT 35111 Query 1574144 GGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCAT 1574203 ||| | ||| |||||||||||| ||||| | |||||||| |||||| | | |||| Sbjct 35110 GGAGATATACAGCAACACGACGCGGTTTGCAATTGCGTGCAATTTGTCGTCAAAGATCAT 35051 Query 1574204 CGAGGCCCTCCAAAGTCGCTGCGC 1574227 |||| | |||| ||| | ||||| Sbjct 35050 CGAGCCGATCCAGAGTAGGTGCGC 35027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106635569040429