Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6033 91.5 2e-12 seq605 91.5 2e-12 >seq6033 Length=19533 Score = 91.5 bits (100), Expect = 2e-12 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 2019210 CACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTC 2019269 |||||| |||| || ||||| ||||| ||| | | || ||| || ||||| ||||| Sbjct 4288 CACAAGCTGATAATACTCGACGAGGCGGACAGTATGACAACGGGTGCGCAGCAAGCCCTG 4347 Query 2019270 CGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCG 2019329 || | |||||| | |||| |||||||||||||||||| | || ||||| |||| Sbjct 4348 CGCCGCATCATGGAGATATACAGCAACACGACGCGGTTTGCAATTGCGTGCAATTTGTCG 4407 Query 2019330 TCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGC 2019364 || | | ||||||| | ||||||| | ||||| Sbjct 4408 TCAAAGATCATCGAGCCGATCCAGAGTAGGTGCGC 4442 >seq605 Length=39468 Score = 91.5 bits (100), Expect = 2e-12 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 2019210 CACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTC 2019269 |||||| |||| || ||||| ||||| ||| | | || ||| || ||||| ||||| Sbjct 35181 CACAAGCTGATAATACTCGACGAGGCGGACAGTATGACAACGGGTGCGCAGCAAGCCCTG 35122 Query 2019270 CGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCG 2019329 || | |||||| | |||| |||||||||||||||||| | || ||||| |||| Sbjct 35121 CGCCGCATCATGGAGATATACAGCAACACGACGCGGTTTGCAATTGCGTGCAATTTGTCG 35062 Query 2019330 TCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGC 2019364 || | | ||||||| | ||||||| | ||||| Sbjct 35061 TCAAAGATCATCGAGCCGATCCAGAGTAGGTGCGC 35027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915593579319143