Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq6002 84.2 3e-11 >seq6002 Length=22930 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 53079 CTTACAATGCAGATTTTGATGGAGATGAAATGAATTTACATATTCCTCAGTCTTATGAAG 53138 |||| ||||||||||||||||| |||||||||||||||||| |||| || ||| | ||| Sbjct 8895 CTTATAATGCAGATTTTGATGGTGATGAAATGAATTTACATCTTCCACAATCTGAGGAAA 8954 Query 53139 CTACTGCAG-AATTAATGGAATT 53160 || ||| | ||||| || |||| Sbjct 8955 CTCGTGCTGAAATTACTGAAATT 8977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655229731833000