Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4956 349 3e-90 seq4042 349 3e-90 seq5859 210 2e-48 seq3117 210 2e-48 seq152 143 2e-28 seq6002 111 1e-18 seq2596 104 2e-16 >seq4956 Length=6978 Score = 349 bits (386), Expect = 3e-90 Identities = 966/1472 (66%), Gaps = 18/1472 (1%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| | ||||| ||||| | ||||| || ||||| | ||| || |||||||| | | Sbjct 1439 TTGTCAACAGCAGTAACATTCAAGATACCGTTAGCATCGACATCGAAAGTGACTTCGACT 1498 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA---TTA 281533 || ||||| || | | ||||||||||| ||| | | ||| | || || || Sbjct 1499 TGTGGGACACCACGTGGGGCAGGTGGGATTCCTGAGAGTTCGAATTTACCGAGCAAGTTG 1558 Query 281534 TTATTATCTTTA-GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTG 281592 |||| | | || | | | |||||||| ||| | | |||||| ||| | | ||| Sbjct 1559 TTATCAGCGGTACGGGCA----CGTTCACCTTCGTAGACTTGGATGAGAACACCTGGTTG 1614 Query 281593 ATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATC 281652 ||||| | ||| || | || | | ||||| || || |||| || ||||| | | Sbjct 1615 GTTATCAGCATAGGTGGAGAAGATTTCAGATTTCTTGCATGGAACAGTGGTGTTACGTTT 1674 Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 || | ||||| | ||||||||| ||||| | |||||| || | || | |||||| Sbjct 1675 GATGAGGGCAGTCATGACACCACCAGCGGTTTCAATACCAAGGGACAATGGGGCGACATC 1734 Query 281713 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAA 281771 | | || | | ||| ||||| || | ||| ||||| |||| ||||| | Sbjct 1735 GAGCAAGAGCAAGTCTTGGGTCTTTTCGGAGGTATCACCGGTCAAGA-TAGCGGCTTGGA 1793 Query 281772 TAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCAT 281831 |||||||| || || || |||||||||||||| | || || | | || ||| || | Sbjct 1794 CGGCAGCACCGTAAGCGACGGCTTCATCAGGATTGATAGATTTGTCCAATTCTTTTCCGT 1853 Query 281832 TGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATA 281891 |||| || | || | | | | || | || ||||| | || || || || || | Sbjct 1854 TGAAGAAGTCAGAGACCATCTTTTGGACTCTTGGGATACGGGTAGAACCACCGACCAAGA 1913 Query 281892 CAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 281951 | ||||| | || |||||||| || | ||| || || || || ||||| || || | Sbjct 1914 CGATTTCGTTGACTTGTGATTTGTCAACTTTGGAGTCTCTCAAGACCTTTTCGACAGGGT 1973 Query 281952 CAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 282011 |||| | ||| || | || ||||||||||| || | || | | | Sbjct 1974 CAAGGGTGGATCTGAAAAGATCGTTGTTGAGTTCTTCGAAACGGGCACGGGTGATGGAGG 2033 Query 282012 CATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071 | |||| |||||| |||| || |||| ||| || |||||||||| | ||| | Sbjct 2034 TGTAGAAATCTTCACCTTCGTACAAGGAGTCAATTTCGATGGTAGTTTGAGCAGCAGAGG 2093 Query 282072 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 282131 | | | ||||| |||||||| || || || | || | |||| | || | | Sbjct 2094 ACAAGGTGCGTTTTGCACGTTCGCAGGCAGTGCGGAGACGACGTAGAGAACGTGG-GTTG 2152 Query 282132 GAT-TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190 || | | |||| | || |||| | ||||| |||| | | | | |||||||||| Sbjct 2153 GAGGTGAGATCTTTCTTGAATTTACGTTTGAATTCTTGAGCGAAGAAGCTTACAAGACGG 2212 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 ||||||||||||||||| ||||| | ||| | || | |||||| | |||| |||| Sbjct 2213 TTATCAAAATCTTCACCACCCAAGTGAGTGTCACCGGCGGTAGCTTTGACTTCAAAAATA 2272 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || ||||| | || | || | ||||| || |||||||||| ||| ||||| || Sbjct 2273 CCGTCTTCGATGGAGAGGAGGGATACATCGAAAGTACCACCACCCAAATCGAAAATGAGG 2332 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 || || ||| | | || || || ||||| || || | ||||| || || ||| Sbjct 2333 ACGTTTTGTTCACCGGCAGACTTCTTGTCGAGACCGTAAGCGATGGCAGCGGCGGTAGGT 2392 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || || || | | | |||||||||||||| || |||||||| |||||||| Sbjct 2393 TCGTTGATGATACGTAGGATGTTAAGACCAGCAATGAGACCAGCATCTTTGGTGGCTTGA 2452 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 | ||| |||||||| || || ||||| ||||| | |||||||| | ||||| ||| Sbjct 2453 CGTTGAGAATCGTTGAAGTAGGCAGGGACAGTTACGACGGCATCCTTAACTTCAGATCCG 2512 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | || || || || | |||||||| | | || |||||||| || |||| ||| ||| Sbjct 2513 AGGTAGGCTTCAGCGGTCTTTTTCATTTCAGTCAAGATCATTGAGGAGATTTCTTCAGGA 2572 Query 282551 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610 || | |||| |||| || ||| |||| | | ||||| || Sbjct 2573 GAGAAGGTTTTGGTTTCACCTTTGTATTCGACTTGACAGGCAGGTTTGCCGTTGTCAGAG 2632 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAA---CACTTTGGTCATTAAAATCT 282667 | ||||| ||| | | ||||||||| ||||| | || || ||| | | Sbjct 2633 ACGACTTTGTATGAGAAGTGTTTCATATCAGATTGGACTTCAGATTCGTCCATGCGA--- 2689 Query 282668 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATAT 282727 | ||| || || || || || |||| | || |||||||| || | || |||||| | Sbjct 2690 CGACCGATCAAACGCTTGACACCAAATACGGTGTTGGTTGGGTTCATGGCGACTTGATTT 2749 Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 ||||| ||||| || || || ||| || || || || | ||| |||||||| || || Sbjct 2750 TTGGCGGCATCACCGATAAGTCTTTCAGTATCAGTGAAAGCAACGTATGATGGGGTGGTT 2809 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 | |||||||| ||||| ||||| ||||| || |||||||||| ||||| || || Sbjct 2810 CTGTTACCTTGGTCATTGGCAATGATTTCGACACGGTCATTTTGCCAGACACCAACGCAG 2869 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || || || ||||| || || | ||| Sbjct 2870 GAGTAGGTGGTACCCAAATCTATTCCGACAGC 2901 >seq4042 Length=8345 Score = 349 bits (386), Expect = 3e-90 Identities = 966/1472 (66%), Gaps = 18/1472 (1%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| | ||||| ||||| | ||||| || ||||| | ||| || |||||||| | | Sbjct 6907 TTGTCAACAGCAGTAACATTCAAGATACCGTTAGCATCGACATCGAAAGTGACTTCGACT 6848 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA---TTA 281533 || ||||| || | | ||||||||||| ||| | | ||| | || || || Sbjct 6847 TGTGGGACACCACGTGGGGCAGGTGGGATTCCTGAGAGTTCGAATTTACCGAGCAAGTTG 6788 Query 281534 TTATTATCTTTA-GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTG 281592 |||| | | || | | | |||||||| ||| | | |||||| ||| | | ||| Sbjct 6787 TTATCAGCGGTACGGGCA----CGTTCACCTTCGTAGACTTGGATGAGAACACCTGGTTG 6732 Query 281593 ATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATC 281652 ||||| | ||| || | || | | ||||| || || |||| || ||||| | | Sbjct 6731 GTTATCAGCATAGGTGGAGAAGATTTCAGATTTCTTGCATGGAACAGTGGTGTTACGTTT 6672 Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 || | ||||| | ||||||||| ||||| | |||||| || | || | |||||| Sbjct 6671 GATGAGGGCAGTCATGACACCACCAGCGGTTTCAATACCAAGGGACAATGGGGCGACATC 6612 Query 281713 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAA 281771 | | || | | ||| ||||| || | ||| ||||| |||| ||||| | Sbjct 6611 GAGCAAGAGCAAGTCTTGGGTCTTTTCGGAGGTATCACCGGTCAAGA-TAGCGGCTTGGA 6553 Query 281772 TAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCAT 281831 |||||||| || || || |||||||||||||| | || || | | || ||| || | Sbjct 6552 CGGCAGCACCGTAAGCGACGGCTTCATCAGGATTGATAGATTTGTCCAATTCTTTTCCGT 6493 Query 281832 TGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATA 281891 |||| || | || | | | | || | || ||||| | || || || || || | Sbjct 6492 TGAAGAAGTCAGAGACCATCTTTTGGACTCTTGGGATACGGGTAGAACCACCGACCAAGA 6433 Query 281892 CAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 281951 | ||||| | || |||||||| || | ||| || || || || ||||| || || | Sbjct 6432 CGATTTCGTTGACTTGTGATTTGTCAACTTTGGAGTCTCTCAAGACCTTTTCGACAGGGT 6373 Query 281952 CAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 282011 |||| | ||| || | || ||||||||||| || | || | | | Sbjct 6372 CAAGGGTGGATCTGAAAAGATCGTTGTTGAGTTCTTCGAAACGGGCACGGGTGATGGAGG 6313 Query 282012 CATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071 | |||| |||||| |||| || |||| ||| || |||||||||| | ||| | Sbjct 6312 TGTAGAAATCTTCACCTTCGTACAAGGAGTCAATTTCGATGGTAGTTTGAGCAGCAGAGG 6253 Query 282072 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 282131 | | | ||||| |||||||| || || || | || | |||| | || | | Sbjct 6252 ACAAGGTGCGTTTTGCACGTTCGCAGGCAGTGCGGAGACGACGTAGAGAACGTGG-GTTG 6194 Query 282132 GAT-TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190 || | | |||| | || |||| | ||||| |||| | | | | |||||||||| Sbjct 6193 GAGGTGAGATCTTTCTTGAATTTACGTTTGAATTCTTGAGCGAAGAAGCTTACAAGACGG 6134 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 ||||||||||||||||| ||||| | ||| | || | |||||| | |||| |||| Sbjct 6133 TTATCAAAATCTTCACCACCCAAGTGAGTGTCACCGGCGGTAGCTTTGACTTCAAAAATA 6074 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || ||||| | || | || | ||||| || |||||||||| ||| ||||| || Sbjct 6073 CCGTCTTCGATGGAGAGGAGGGATACATCGAAAGTACCACCACCCAAATCGAAAATGAGG 6014 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 || || ||| | | || || || ||||| || || | ||||| || || ||| Sbjct 6013 ACGTTTTGTTCACCGGCAGACTTCTTGTCGAGACCGTAAGCGATGGCAGCGGCGGTAGGT 5954 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || || || | | | |||||||||||||| || |||||||| |||||||| Sbjct 5953 TCGTTGATGATACGTAGGATGTTAAGACCAGCAATGAGACCAGCATCTTTGGTGGCTTGA 5894 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 | ||| |||||||| || || ||||| ||||| | |||||||| | ||||| ||| Sbjct 5893 CGTTGAGAATCGTTGAAGTAGGCAGGGACAGTTACGACGGCATCCTTAACTTCAGATCCG 5834 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | || || || || | |||||||| | | || |||||||| || |||| ||| ||| Sbjct 5833 AGGTAGGCTTCAGCGGTCTTTTTCATTTCAGTCAAGATCATTGAGGAGATTTCTTCAGGA 5774 Query 282551 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610 || | |||| |||| || ||| |||| | | ||||| || Sbjct 5773 GAGAAGGTTTTGGTTTCACCTTTGTATTCGACTTGACAGGCAGGTTTGCCGTTGTCAGAG 5714 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAA---CACTTTGGTCATTAAAATCT 282667 | ||||| ||| | | ||||||||| ||||| | || || ||| | | Sbjct 5713 ACGACTTTGTATGAGAAGTGTTTCATATCAGATTGGACTTCAGATTCGTCCATGCGA--- 5657 Query 282668 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATAT 282727 | ||| || || || || || |||| | || |||||||| || | || |||||| | Sbjct 5656 CGACCGATCAAACGCTTGACACCAAATACGGTGTTGGTTGGGTTCATGGCGACTTGATTT 5597 Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 ||||| ||||| || || || ||| || || || || | ||| |||||||| || || Sbjct 5596 TTGGCGGCATCACCGATAAGTCTTTCAGTATCGGTGAAAGCAACGTATGATGGGGTGGTT 5537 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 | |||||||| ||||| ||||| ||||| || |||||||||| ||||| || || Sbjct 5536 CTGTTACCTTGGTCATTGGCAATGATTTCGACACGGTCATTTTGCCAGACACCAACGCAG 5477 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || || || ||||| || || | ||| Sbjct 5476 GAGTAGGTAGTACCCAAATCTATTCCGACAGC 5445 >seq5859 Length=25575 Score = 210 bits (232), Expect = 2e-48 Identities = 425/621 (68%), Gaps = 26/621 (4%) Strand=Plus/Minus Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC--TTTGTCTT 282329 || |||||| ||||||||||| | |||| ||| ||||| | || || | | |||| Sbjct 5708 GTGACATCAAAAGTTCCACCACCAAAATCATAAACAAGTATACTCTCGTCAATATCTCTT 5649 Query 282330 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389 | ||| || | |||||||||| || ||||||||||| ||||| || |||| | | Sbjct 5648 GAATTTGATAAT--CCATACGCAATTGCTGCAGCAGTTGGCTCATTGATTATTCGAATCA 5591 Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449 |||| | ||| |||||| |||| ||||| ||||||| || |||||||| | ||| |||| Sbjct 5590 CATTTAAACCCGCAATTTTTCCAGCATCAATAGTGGCCTGCCTTTGTGAGTTGTTGAAAT 5531 Query 282450 ATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTT 282509 | |||||||| || ||||| || || | | ||| | || | ||| | ||||||| Sbjct 5530 ACGCAGGAACTGTGATAACTGCGTCATTAATTTCGTGCCCTAAGTAATCTTCAGCTGTTT 5471 Query 282510 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCAT 282569 ||| | || ||| |||||| | |||||||| |||||| | ||||||||| |||| Sbjct 5470 TTTTTAAACTAGTTAGAATCATAGCTGAAATTTCTTCTGGTGTATATTGCTTCTTTTCAC 5411 Query 282570 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAACTTTAAATGGCC 282626 | || |||| ||| ||| || ||| | || | |||||||||||| Sbjct 5410 CTAAGTAATCGACTTGAAATACTGG---GTTTCCATCTTTTGAAGCAACTTTAAATGGTA 5354 Query 282627 A-ATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 282685 | ||| | |||| | || | | | || ||||| | || ||| ||||| || | |||| Sbjct 5353 ATTTATCTAATATAGGTTTTATCTC-TTCGTCATCTATATGTCTTCCAATAAACCTTTTT 5295 Query 282686 --GCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAA 282743 ||||| ||| ||||| |||| || | |||||||||| | | || | ||||||| Sbjct 5294 GCGCATC--TAATCGTATTTTTTGGGTTCATAGCAGCTTGATTTATCGCAGACTCTCCAA 5237 Query 282744 TCAGATGTTCTGTCTCTG-----TAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 282798 | | ||| || ||| ||||| ||| |||||||||| || | | |||| Sbjct 5236 TAA----ATCTTTC-CTGAGAACCAAATGCTACACATGATGGAGTAGTTCTAATACCAAA 5182 Query 282799 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 282858 |||| ||||||| ||| |||||||||| | | | |||||| ||||| Sbjct 5181 TCCATTTGCAATAACTTCGCTCCTACCATTTTGATAAGCGCATACACACGAGTTTGTTGT 5122 Query 282859 TCCTAAATCAATACCAATAGC 282879 ||||||| ||| || ||||| Sbjct 5121 GCCTAAATAAATTCCTATAGC 5101 Score = 116 bits (128), Expect = 3e-20 Identities = 223/326 (68%), Gaps = 12/326 (4%) Strand=Plus/Minus Query 85930 TCAATTAGAATATGGTTCATTATCAAATAGTCAAAATCTTCTCCTCCCAAATGTGTATTA 85989 ||||| | |||||| ||| |||| | ||| | |||||| |||||||| | || | | Sbjct 5813 TCAATAA-AATATG--TCAAAATCACACTGTCTATATCTTCACCTCCCAAGTTAGTGTCA 5757 Query 85990 CCACCTACTGCCAATGTTCTAAATACTCCATTTGAGATATTCATTAACGAAACATCTAAT 86049 || || ||||| ||||| | ||| |||| || | | || ||||| || Sbjct 5756 CCTCCAGTAGCCAAAACATTAAATTCATAATTACAGATTTTAAGAATCGTGACATCAAAA 5697 Query 86050 GTCCCAGCTCCTAAGTCATAAACAATTACGTTACCACCAGtttttttATTCCATTTTTCA 86109 || ||| | || || |||||||||| || ||| | | | | | | || | Sbjct 5696 GTTCCACCACCAAAATCATAAACAAGTA---TAC------TCTCGTCAATATCTCTTGAA 5646 Query 86110 CTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCT 86169 || ||| || || |||| ||||| |||||||| ||||| |||||| || |||| | Sbjct 5645 TTTGATAATCCATACGCAATTGCTGCAGCAGTTGGCTCATTGATTATTCGAATCACATTT 5586 Query 86170 AAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCT 86229 |||||||||||||| ||| ||||| ||| || || || |||| || || ||||| || Sbjct 5585 AAACCCGCAATTTTTCCAGCATCAATAGTGGCCTGCCTTTGTGAGTTGTTGAAATACGCA 5526 Query 86230 GGTACAGTAATAACTGCTTTATTAAT 86255 || || || |||||||| | |||||| Sbjct 5525 GGAACTGTGATAACTGCGTCATTAAT 5500 >seq3117 Length=27610 Score = 210 bits (232), Expect = 2e-48 Identities = 425/621 (68%), Gaps = 26/621 (4%) Strand=Plus/Plus Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC--TTTGTCTT 282329 || |||||| ||||||||||| | |||| ||| ||||| | || || | | |||| Sbjct 24492 GTGACATCAAAAGTTCCACCACCAAAATCATAAACAAGTATACTCTCGTCAATATCTCTT 24551 Query 282330 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389 | ||| || | |||||||||| || ||||||||||| ||||| || |||| | | Sbjct 24552 GAATTTGATAAT--CCATACGCAATTGCTGCAGCAGTTGGCTCATTGATTATTCGAATCA 24609 Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449 |||| | ||| |||||| |||| ||||| ||||||| || |||||||| | ||| |||| Sbjct 24610 CATTTAAACCCGCAATTTTTCCAGCATCAATAGTGGCCTGCCTTTGTGAGTTGTTGAAAT 24669 Query 282450 ATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTT 282509 | |||||||| || ||||| || || | | ||| | || | ||| | ||||||| Sbjct 24670 ACGCAGGAACTGTGATAACTGCGTCATTAATTTCGTGCCCTAAGTAATCTTCAGCTGTTT 24729 Query 282510 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCAT 282569 ||| | || ||| |||||| | |||||||| |||||| | ||||||||| |||| Sbjct 24730 TTTTTAAACTAGTTAGAATCATAGCTGAAATTTCTTCTGGTGTATATTGCTTCTTTTCAC 24789 Query 282570 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAACTTTAAATGGCC 282626 | || |||| ||| ||| || ||| | || | |||||||||||| Sbjct 24790 CTAAGTAATCGACTTGAAATACTGG---GTTTCCATCTTTTGAAGCAACTTTAAATGGTA 24846 Query 282627 A-ATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 282685 | ||| | |||| | || | | | || ||||| | || ||| ||||| || | |||| Sbjct 24847 ATTTATCTAATATAGGTTTTATCTC-TTCGTCATCTATATGTCTTCCAATAAACCTTTTT 24905 Query 282686 --GCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAA 282743 ||||| ||| ||||| |||| || | |||||||||| | | || | ||||||| Sbjct 24906 GCGCATC--TAATCGTATTTTTTGGGTTCATAGCAGCTTGATTTATCGCAGACTCTCCAA 24963 Query 282744 TCAGATGTTCTGTCTCTG-----TAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 282798 | | ||| || ||| ||||| ||| |||||||||| || | | |||| Sbjct 24964 TAA----ATCTTTC-CTGAGAACCAAATGCTACACATGATGGAGTAGTTCTAATACCAAA 25018 Query 282799 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 282858 |||| ||||||| ||| |||||||||| | | | |||||| ||||| Sbjct 25019 TCCATTTGCAATAACTTCGCTCCTACCATTTTGATAAGCGCATACACACGAGTTTGTTGT 25078 Query 282859 TCCTAAATCAATACCAATAGC 282879 ||||||| ||| || ||||| Sbjct 25079 GCCTAAATAAATTCCTATAGC 25099 Score = 116 bits (128), Expect = 3e-20 Identities = 223/326 (68%), Gaps = 12/326 (4%) Strand=Plus/Plus Query 85930 TCAATTAGAATATGGTTCATTATCAAATAGTCAAAATCTTCTCCTCCCAAATGTGTATTA 85989 ||||| | |||||| ||| |||| | ||| | |||||| |||||||| | || | | Sbjct 24387 TCAATAA-AATATG--TCAAAATCACACTGTCTATATCTTCACCTCCCAAGTTAGTGTCA 24443 Query 85990 CCACCTACTGCCAATGTTCTAAATACTCCATTTGAGATATTCATTAACGAAACATCTAAT 86049 || || ||||| ||||| | ||| |||| || | | || ||||| || Sbjct 24444 CCTCCAGTAGCCAAAACATTAAATTCATAATTACAGATTTTAAGAATCGTGACATCAAAA 24503 Query 86050 GTCCCAGCTCCTAAGTCATAAACAATTACGTTACCACCAGtttttttATTCCATTTTTCA 86109 || ||| | || || |||||||||| || ||| | | | | | | || | Sbjct 24504 GTTCCACCACCAAAATCATAAACAAGTA---TAC------TCTCGTCAATATCTCTTGAA 24554 Query 86110 CTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCT 86169 || ||| || || |||| ||||| |||||||| ||||| |||||| || |||| | Sbjct 24555 TTTGATAATCCATACGCAATTGCTGCAGCAGTTGGCTCATTGATTATTCGAATCACATTT 24614 Query 86170 AAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCT 86229 |||||||||||||| ||| ||||| ||| || || || |||| || || ||||| || Sbjct 24615 AAACCCGCAATTTTTCCAGCATCAATAGTGGCCTGCCTTTGTGAGTTGTTGAAATACGCA 24674 Query 86230 GGTACAGTAATAACTGCTTTATTAAT 86255 || || || |||||||| | |||||| Sbjct 24675 GGAACTGTGATAACTGCGTCATTAAT 24700 >seq152 Length=24989 Score = 143 bits (158), Expect = 2e-28 Identities = 461/704 (65%), Gaps = 26/704 (4%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 ||||||||||||| |||||||| | ||| | || || ||||| ||||| || | Sbjct 1783 TTATCAAAATCTTGTCCTCCCAAGTGAGTGTCACCGGATGTAGCCAATACTTCAAAGACA 1842 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAA----AAT 282306 ||||| |||| || ||| | | ||||||| || ||||| || | ||| | || Sbjct 1843 CCATCATCAATAGTCAATAATGAAACATCAAAAGTACCACCTCCGAGATCGTATACCAAG 1902 Query 282307 AAGT-ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 282365 | || || |||| | | | ||||| | |||||| || | |||||| |||| Sbjct 1903 ATGTGACGTTCACCACCCT--------TCTTATCCAAACCATAAGCGATAGCAGCGGCAG 1954 Query 282366 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425 |||||||||||| |||||| | || || |||||||||||| || ||||| || |||| Sbjct 1955 TTGGTTCATTAACAATTCTAAGTACGTTGAGACCAGCAATTTGACCGGCATCCTTGGTGG 2014 Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 |||||||||| | ||| || || || || ||||| | || || | || |||| Sbjct 2015 CTTGTCTTTGGGCATCAGAGAAGTAGGCGGGTACAGTTACGACAGCGTGGGTGACTTTAG 2074 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 | || || | || ||| |||||| || | |||| ||| | |||| || || Sbjct 2075 TGTTAAGGTAGGATTCAGCAATTTCTTTCATCTTGGTCAAAACCATGGCGGAAACTTCTT 2134 Query 282546 CTGGA--GAATAT-TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTAC 282602 | ||| ||| | | ||| || ||| | || |||| | | ||| || ||| Sbjct 2135 CAGGAGTGAAGGTCTTCTTTCCGTC-TTTCAAGTTG--ACTTGCATAAGTGGCTTGTTAG 2191 Query 282603 CAACATTAATAACTTTAAATGGCCAATATTTCATAT-CTGATTGAACACTTTGGTCATTA 282661 || | || | |||| ||| | ||||||| || |||| ||| | || Sbjct 2192 ATTTGTTCTTGACAGTGAATGACCAGTGCTTCATATCCTTCTTGACTTCTTCAG-AGTTG 2250 Query 282662 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCT 282721 || | | || ||||||| || | || || | || || || || || ||| Sbjct 2251 AAGTTCATTCCGATTAATCTCTTAGAGTCGAATAGGGTGTTTTCAGGGTTGTTAGCGGCT 2310 Query 282722 TGATATTTGGCTGCATCTCCAATCAGATGTT---CTGTCTCT-GTAAATGAAACATATGA 282777 |||| ||| || ||||| || |||| || || | ||| | || | | || ||||| Sbjct 2311 TGATTTTTAGCAGCATCACCGATCA-ATCTTTCACCATCTTTGGTCCAGGCGACGTATGA 2369 Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 282837 || || | | |||||||| || || |||||||||||||| || |||| ||| Sbjct 2370 AGGGGTAATTCTGTTACCTTGTTCGTTAGCAATAATTTCAACACGGCCGTTTTTGTGTAC 2429 Query 282838 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAA 282881 ||| ||||| | |||||||||| ||||||||||||||| ||| Sbjct 2430 ACCAACACATGAATAAGTTGTTCCCAAATCAATACCAATAACAA 2473 >seq6002 Length=22930 Score = 111 bits (122), Expect = 1e-18 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||||| |||||| | |||| ||| | |||||| ||||| |||| ||| | || || Sbjct 9914 GAATTTTACTTCCACGCCATGGGAGGTAGAGAAGGTCTTATTGATACTGCTGTAAAGACA 9973 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 || || ||||||||||| ||||||| |||||| ||| ||||||||||||| | Sbjct 9974 GCCGAGACTGGTTATATCCAAAGAAGACTTGTTAAGGCTCTTGAAGATATTATGGTTCAT 10033 Query 435253 TATGATGGTACAGTGAGAAAT 435273 ||||||||||| || |||||| Sbjct 10034 TATGATGGTACTGTCAGAAAT 10054 Score = 107 bits (118), Expect = 1e-17 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 432264 AAATCAATGTCTGAAAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGA 432323 ||||| || || |||| ||| || |||||||| | ||||||||||| | |||||| Sbjct 8432 AAATCTATTCGTGCAAGACTGAAGGGAAAAGAAGGAAGAGTTAGAGGAAATCTTATGGGA 8491 Query 432324 AAGCGTGTCGATATGTCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAAT 432383 |||||||| ||| | |||||| | || |||||||| ||| |||||||||| | | || Sbjct 8492 AAGCGTGTTGATTTTTCTGCAAGAACTGTTATTACCGGTGACCCTAATATTGATATTGAT 8551 Query 432384 GAAGTTGGTGTTCCTCTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAA 432443 |||| ||||| ||| | ||| || | |||| | ||||| ||| | ||||| Sbjct 8552 CAAGTAGGTGTCCCTAGAAGTATCGCTAGAAATATGACTTTCCCTGAAGTAGTAACTCCC 8611 Query 432444 CATAATATTGAT 432455 ||||||| ||| Sbjct 8612 TATAATATCGAT 8623 >seq2596 Length=42475 Score = 104 bits (114), Expect = 2e-16 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || |||| |||||| || ||||| || ||||| |||||||| || | ||| | ||| ||| Sbjct 3079 TTTTCAACACCATAAGCCAAAGCGGCGGCAGTAGGTTCATTGATGACTCTAAGAACGTTA 3020 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 ||||| | ||| || |||||||| |||||||| | ||| ||||| || || || || Sbjct 3019 AGACCGGAAATAGAACCGGCATCTTTGGTGGCTTGACGTTGAGAATCATTGAAGTAAGCT 2960 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || ||||| || || |||| | | || | || | || || || |||| |||| Sbjct 2959 GGGACAGTGATTACAGCATTTTTAACAGGGGTACCCAAGTAGGCTTCAGCAGTTTCTTTC 2900 Query 282515 ATTTTAC 282521 ||||||| Sbjct 2899 ATTTTAC 2893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740329099234962