Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2855 86.0 2e-11 >seq2855 Length=12074 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 |||||| ||| || ||||| | || || || ||| ||| ||| ||||||||||| | Sbjct 5354 GCTTTTTGTGTCGTAGAAGGCATATTCTTCAGTGGCTCCTTC-GCCGCCATCTTCTGGCT 5296 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||||||||||| ||||||| |||||| || || |||||||| ||| || | || || Sbjct 5295 CAAAAAGCGTGGCCTTATGCCCGGTCTTACTTTCTCAAACGAACTTATCTGTAGAGATGA 5236 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||| | || ||| |||| ||| || Sbjct 5235 AGGTCTTCACACCGATTTCGGCTGCCT 5209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588211108643965