Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2855 98.7 1e-15 >seq2855 Length=12074 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||||||||| | || | ||| || || || | ||| || |||||||| |||||||| Sbjct 5233 CCTTCATCTCTACAGATAAGTTCGTTTGAGAAAGTAAGACCGGGCATAAGGCCACGCTTT 5292 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGAC-ACACGCAAA 74887 || | ||| |||||||| |||||| ||||||||||| |||||||| || |||| ||| Sbjct 5293 TTGAGCCAGAAGATGGCGGCGAAGGAGCCACTGAAGAATATGCCTTCTACGACACAAAAA 5352 Query 74888 G 74888 | Sbjct 5353 G 5353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547174021692600