Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25]
6,137 sequences; 77,124,806 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq5784 98.7 9e-16
seq2842 98.7 9e-16
>seq5784
Length=6787
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 41631 CACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGT 41690
|||| || || |||||||| | |||| || || || || || |||||||| ||||
Sbjct 511 CACCACCACCACGTAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGT 570
Query 41691 CGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750
|||| | |||||| | || || || ||||| ||||| || |||| ||| || || || |
Sbjct 571 CGGATAAGGTGCGGCCATCTTCTAGTTGCTTACCGGCAAAAATCAAGCGTTGCTGATCTG 630
Query 41751 CGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACT 41810
|||| | ||||| || |||||||| || | | | || || || |
Sbjct 631 GAGGAATTCCTTCCTTATCTTGAATTTTTTGTTTAACATTCTCGATAGAATCAGAAGATT 690
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || || | ||||| |||||||| || || |||||||| |||||||||||
Sbjct 691 CTACTTCGAGGGTTATGGTTTTACCTGTAAGAGTCTTTACAAAAATCTGCAT 742
>seq2842
Length=19016
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 41631 CACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGT 41690
|||| || || |||||||| | |||| || || || || || |||||||| ||||
Sbjct 512 CACCACCACCACGTAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGT 571
Query 41691 CGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750
|||| | |||||| | || || || ||||| ||||| || |||| ||| || || || |
Sbjct 572 CGGATAAGGTGCGGCCATCTTCTAGTTGCTTACCGGCAAAAATCAAGCGTTGCTGATCTG 631
Query 41751 CGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACT 41810
|||| | ||||| || |||||||| || | | | || || || |
Sbjct 632 GAGGAATTCCTTCCTTATCTTGAATTTTTTGTTTAACATTCTCGATAGAATCAGAAGATT 691
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || || | ||||| |||||||| || || |||||||| |||||||||||
Sbjct 692 CTACTTCGAGGGTTATGGTTTTACCTGTAAGAGTCTTTACAAAAATCTGCAT 743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462268535504400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |