Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2890 93.3 9e-14 seq5440 89.7 1e-12 >seq2890 Length=18097 Score = 93.3 bits (102), Expect = 9e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 115371 CTGCGCGTCGTCAACTTTCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGAT 115430 |||| || ||| | |||| |||| ||| | ||||||||||||||| ||||||||||| Sbjct 16186 CTGCTGGTTGTCCAGCTTCGCAAACTTTAGCAACGCACATCTGCTCTGTATCGGTTCGAT 16245 Query 115431 GATTTTGGTGGAGTTGTTGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCAT 115490 |||||| | || ||||| | || |||||||||||| | ||| | ||||| Sbjct 16246 GATTTTTGACGACAAATTGCACGCAATTGCAAACCGCGTCGTGTTGCTGTATATCTCCAT 16305 Query 115491 GATCCGTCGCAGCGCCTGGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAG 115544 ||| || ||||| || || || || | ||||| ||| ||||||||||| Sbjct 16306 GATGCGGCGCAGGGCTTGCTGCGCGCCCGTCGTCATACTGTCCGCCTCGTCGAG 16359 >seq5440 Length=19520 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 115371 CTGCGCGTCGTCAACTTTCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGAT 115430 |||| || ||| | |||| |||| ||| | ||||||||||||||| ||||||||||| Sbjct 414 CTGCTGGTTGTCCAGCTTCGCAAACTTTAGCAACGCACATCTGCTCTGTATCGGTTCGAT 473 Query 115431 GATTTTGGTGGAGTTGTTGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCAT 115490 |||||| | || ||||| | || |||||||||||| | ||| | ||||| Sbjct 474 GATTTTTGACGACAAATTGCACGCAATTGCAAACCGCGTCGTGTTGCTGTATATCTCCAT 533 Query 115491 GATCCGTCGCAGCGCCTGGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAG 115544 || || ||||| || || || || | ||||| ||| ||||||||||| Sbjct 534 AATGCGGCGCAGGGCTTGCTGCGCGCCCGTCGTCATACTGTCCGCCTCGTCGAG 587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073659792109632