Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq770 154 2e-33 seq3821 123 4e-24 >seq770 Length=24254 Score = 154 bits (170), Expect = 2e-33 Identities = 184/246 (75%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| ||| |||||||||||||||| |||||||||||||||||| | | || |||||| Sbjct 19453 AGAT-TCTAAGAGATAACATCCAAGGTATCACCAAGCCAGCTATCAGAAGACTTGCTCGT 19511 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 |||||||| ||||| ||| ||||||| | |||||||||| | ||| || | || Sbjct 19512 CGTGGTGGTGTCAAACGTATCTCTGGCCTCATCTATGAAGAAACCCGTCTAGTCCTCAAA 19571 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATG-CTTTCCACTATACCGAGCACGCTAAACGTAA 16626 ||||| | | ||||||| || | | || || ||||| || ||||| ||||| || Sbjct 19572 CTCTTCTTGGAACACGTTATCAGAGACGCCGTTACA-TATACTGAACACGCCAAACGCAA 19630 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||||||||||| | ||| |||||||||| | ||| | |||||||| | | || || Sbjct 19631 AACTGTCACCTCTCTCGATGTCGTCTATGCCCTCAAAAGACAAGGCCGCACTTTGTACGG 19690 Query 16687 TTTTGG 16692 ||| || Sbjct 19691 TTTCGG 19696 >seq3821 Length=5200 Score = 123 bits (136), Expect = 4e-24 Identities = 175/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| ||| |||||||||||||||| || || |||||||||||| | | || |||||| Sbjct 4388 AGAT-TCTAAGAGATAACATCCAAGGTATTACAAAGCCAGCTATCAGAAGACTTGCTCGT 4446 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 |||||||| ||||| ||| | || || | | || ||||| | || ||| || || Sbjct 4447 CGTGGTGGTGTCAAACGTATTTCAGGTCTCATTTACGAAGAAACACGCTCTGTATTAAAA 4506 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | ||||| | |||||| |||||| || || ||||| ||||| ||||| || Sbjct 4507 CTTTTCCTAGAACACGTTATTAGAGATGCTGTCACATACACCGAACACGCCAAACGCAAA 4566 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| || || | ||| | || ||||| | ||| | |||||||| | || || ||| Sbjct 4567 ACTGTTACTTCTCTCGATGTAGTATATGCCCTTAAAAGACAAGGCCGCACCATCTACGGT 4626 Query 16688 TTTGG 16692 || || Sbjct 4627 TTCGG 4631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068115035057