Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq5539 86.0 7e-12 >seq5539 Length=6842 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || |||||||| |||||||| | || || || | || ||||| || ||||| ||||| Sbjct 1003 TCTTTTTGAATGTTGTAATCGGACAAGGTACGGCCATCTTCTAGTTGTTTACCGGCGAAA 1062 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | || ||||| || | || | | ||||| || |||||||||||| | || Sbjct 1063 ATCAAGCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGGATTTTTTGTTTAACATTC 1122 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | | || ||||| || || | || |||||||| || || || ||||||||| Sbjct 1123 TCAATAGAATCAGAAGATTCTACTTCAAGAGTTATGGTTTTACCTGTAAGAGTCTTTACA 1182 Query 42198 AAGATTTGCATT 42209 || || |||||| Sbjct 1183 AAAATCTGCATT 1194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543160183050160