Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq923 147 5e-30 >seq923 Length=21762 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||||||||| || || ||||||| ||||||||||| |||||| | || ||| Sbjct 10603 AGAACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCGTCT 10662 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || ||||| |||||||| |||||||| || |||||||| || Sbjct 10663 TCGAGCTGTTTACCTGCGAAAATGAGACGTTGCTGGTCTGGTGGGATTCCTTCCTTGTCT 10722 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||||| ||| || | ||||||| | ||| || || | ||||| ||| Sbjct 10723 TGGATTTTCTGCTTGACGTTGTCAATTGTGTCTGAAGATTCGACTTCAAGGGTGATAGTC 10782 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || |||||||| || |||||||| Sbjct 10783 TTACCTGTTAGAGTTTTGACGAAAATTTG 10811 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||||||||| || || ||||||| ||||||||||| ||||| | || ||| Sbjct 10375 AGAACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCAGATAAAGTGCGGCCGTCT 10434 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || ||||| |||||||| |||||||| || |||||||| || Sbjct 10435 TCAAGCTGTTTACCTGCGAAAATGAGACGTTGCTGGTCTGGTGGGATTCCTTCCTTGTCT 10494 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||||| ||| || | ||||||| | ||| || || | ||||| ||| Sbjct 10495 TGAATTTTCTGCTTGACGTTGTCAATTGTGTCTGAAGATTCGACTTCAAGGGTGATAGTC 10554 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || |||||||| Sbjct 10555 TTACCTGTAAGGGTCTTTACGAAAATTTG 10583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178804551874183