Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5042 86.0 8e-12 >seq5042 Length=7215 Score = 86.0 bits (94), Expect = 8e-12 Identities = 93/122 (76%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 102200 GTGT-GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGC 102258 |||| ||||| || ||||||||| ||| || || ||| || | |||||||| |||| Sbjct 5811 GTGTCGTTGAAGGCATCTTCTTCAGTGGCTCTTTTGCCGCCATCTTCTGGCTCAAAAAGC 5752 Query 102259 GAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCC 102318 | || |||||||| ||||| ||||||||||| ||||||| | | ||||| || || | Sbjct 5751 GTGGCCTCATGCCCGGTCTTACTTTCTCCAACGAACTTATCTGTAGAGACGAAGGTCTTC 5692 Query 102319 AC 102320 || Sbjct 5691 AC 5690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620682273339280