Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2634 230 3e-55 seq2445 96.9 4e-15 seq5873 91.5 2e-13 seq2186 91.5 2e-13 seq707 91.5 2e-13 seq338 91.5 2e-13 seq7268 89.7 6e-13 seq5324 89.7 6e-13 seq2990 89.7 6e-13 seq2577 89.7 6e-13 seq2441 89.7 6e-13 seq656 86.0 7e-12 >seq2634 Length=12318 Score = 230 bits (254), Expect = 3e-55 Identities = 627/954 (66%), Gaps = 26/954 (3%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||||||||| || | ||||| |||| | ||||| ||| ||||||||| | Sbjct 8631 GGAAGAGCAATAGAGGCTAAGTTGCAAACAGCAACTTCGTCCTTGGAGGTGTATTCAACG 8572 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 ||||| || || | ||| || || ||||| || | ||| | || || |||||| | Sbjct 8571 ATTTCAGTGCAAAGGTTTGAGCTTTTAATTGTTCCGAGGTTTTGTTGGTTAGATTTGCCG 8512 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 || || || || || |||||||||||||| || |||||||| | || || | | ||| Sbjct 8511 TTACAAGCGTCTTTGTAGAGCATGTATGGAGTTCCAGTTTCGATTTGGGAATCTAAAATA 8452 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCG----AGACCTTC---CTCC 110511 || | ||| | | || ||| |||| |||||| ||| |||||||| | Sbjct 8451 GCGTACCAGA-----GTTGCTGGG-CAGTGATGCGTTTGCGAGGAAGACCTTCAGTGTTT 8398 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 ||||| || ||| | || || || | || || | || |||| ||||| || Sbjct 8397 TCGTATTTTAGGTAGAGTTCATCGAACTTCTCGCCCCAAACGTCAGCTAGACCAGGGGCT 8338 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | | ||| ||||| | ||||| | || ||| ||| | |||||| |||||| Sbjct 8337 TCATGGGGGCAGAATAATGACCAGTCACCGTTTTCCAAAACGCGGCGCATGAAAAGGTCA 8278 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 |||||||| | | |||| | ||||||| |||| ||||| | ||| || || Sbjct 8277 GGAATCCAAAGACCGTAGAACAAGTCACGGGCACGATTTTCTTCTTTACCGTGATTTTTT 8218 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 | ||| | ||||| || | || || | ||||||||||| || || | |||| || Sbjct 8217 CTTAGGTTTAAAAATTCAAAAATGTCGGCATGCCATGGTTCAAGGTAAATGGCGAAGGCG 8158 Query 110752 CCCTTACG--ACGACCCGCC-TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 || ||| ||||| |||| || || | || || | ||||| || |||| Sbjct 8157 CCTGGACGTTTGTTGCCGCCTTGGTCGACGTATCTAGCGGTAGTGTTGAATACTTGGAGC 8098 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868 || |||| |||||| | || |||||| || || || || | | |||||| Sbjct 8097 ATTGGAACAATTCCGTTCGAAGTACCATTGGTTCCGGCGATGTAAGAGCCAGTTGCACGA 8038 Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTG 110928 || | ||||||| | |||||| ||||| || | ||| |||| || || | | | Sbjct 8037 ATATTGTGGATACTTAGACCAATTCCACCAGCAGATTTAGAGATTTTAGCGCATTGGGAG 7978 Query 110929 AGTGTACCATAAATACCATCAATCGAAT----CTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | ||| |||||||||| || || || | |||| ||||| |||| ||||| || Sbjct 7977 ATAGTATCATAAATACCTTCGATGGAGTCATCCTGCATTGTTAGCAA----GAAGCAGGA 7922 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 | | |||||||||| ||||| | ||||| |||||||| | |||||| | || | Sbjct 7921 ACTTAGCTGAGGACGATTAGTTCCAGAGTTGAAAAGTGTAGGAGAGGCATGAGTAAAAAA 7862 Query 111045 ACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACC 111104 | || ||||| || |||||| || ||||| | | ||| | || || ||||| Sbjct 7861 GCGCTGTGACATGAGGTGGTATGTAGTGATAGCGGATTGGATATCATCGCCATGGATACC 7802 Query 111105 AATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTG 111164 |||| || ||||||| | ||||| || |||| || | || || ||||| | | Sbjct 7801 AATGCTGACGCGCATGAGAAGGTATTGTGGTCTTTCAATAATTTTACCGTCAACTTTCAG 7742 Query 111165 AAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACG 111218 |||||| | | || ||||| |||| |||||||| | |||| |||||||| Sbjct 7741 GAGGTAAGACCTTTCGAGGGTTTTGAAGCCAAAGTAGTTATAATCAAAATCACG 7688 >seq2445 Length=6771 Score = 96.9 bits (106), Expect = 4e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 4740 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 4681 Query 136777 GGGAACAGCTT 136787 | || |||||| Sbjct 4680 GTGAGCAGCTT 4670 >seq5873 Length=7780 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 7503 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 7562 Query 136777 GGGAACAGCT 136786 | || || || Sbjct 7563 GTGAGCATCT 7572 >seq2186 Length=9112 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 205 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 146 Query 136777 GGGAACAG 136784 | || ||| Sbjct 145 GTGAGCAG 138 >seq707 Length=10091 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 4729 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 4670 Query 136777 GGGAACAG 136784 | || ||| Sbjct 4669 GTGAGCAG 4662 >seq338 Length=23786 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 485 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 544 Query 136777 GGGAACAGCT 136786 | || || || Sbjct 545 GTGAGCATCT 554 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 8170 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 8111 Query 136777 GGGAACAGCT 136786 | || || || Sbjct 8110 GTGAGCATCT 8101 >seq7268 Length=14727 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 7443 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 7384 Query 136777 GGGAACA 136783 | || || Sbjct 7383 GTGAGCA 7377 >seq5324 Length=5201 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 5061 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 5120 Query 136777 GGGAACA 136783 | || || Sbjct 5121 GTGAGCA 5127 >seq2990 Length=3270 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 720 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 661 Query 136777 GGGAACA 136783 | || || Sbjct 660 GTGAGCA 654 >seq2577 Length=6122 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 4391 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 4332 Query 136777 GGGAACA 136783 | || || Sbjct 4331 GTGAGCA 4325 >seq2441 Length=2210 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 1716 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 1657 Query 136777 GGGAACA 136783 | || || Sbjct 1656 GTGAGCA 1650 >seq656 Length=24272 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 |||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 7947 TAGCTCAGCTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 7888 Query 136777 GGGAACA 136783 | || || Sbjct 7887 GTGAGCA 7881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588918950312200