Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq22 120 4e-22 >seq22 Length=60687 Score = 120 bits (132), Expect = 4e-22 Identities = 285/423 (67%), Gaps = 12/423 (3%) Strand=Plus/Minus Query 159385 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATG 159444 ||||| | ||||| | ||| || ||||| |||||||| || ||||| || || ||| Sbjct 3985 AGAAACATTTGTTTAGTTCCAACATCTGCACACGGAACTAACCCCGCATCCGCTGTAATG 3926 Query 159445 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGAT 159504 || | || ||||| ||| || |||||| | || || |||| | || Sbjct 3925 GCGAACCTAAAGGTTGTTACTGTAAAATGTGATAGCAAAGGATACCTAGATTTAGCTGAC 3866 Query 159505 CTAGAGAAGAAAGCAATCATGAATACATTT-GAAC---TGTCATGTATTATGATTACATA 159560 ||| | |||| ||| || ||||| ||| |||| | | ||||||||||||| Sbjct 3865 CTAAAATTGAAA----TCAGAAAAACATTCAGAAAATTTGTCTTCTGTTATGATTACATA 3810 Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATG 159619 ||||| || | || | || ||| | ||||| | | | || ||||||||||||| Sbjct 3809 CCCATCCACTTACGGAATTTTCGAAGAAGGCATCAAAGAAGCTACA-AAGATTGTTCATG 3751 Query 159620 AGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAA 159679 | |||||||||| || ||| | || |||||||| | |||||||| | ||| || | | Sbjct 3750 ATAATGGTGGTCTAGTTTATATGGACGGTGCAAACTTGAATGCACAAATCGGTATAACTA 3691 Query 159680 AACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738 | ||| |||| ||| || || ||||| || ||| | || ||||| | | ||| || Sbjct 3690 ACCCAGGTGA-TATGGGGGCTGATGTTTGCCATATCAATAACCATAAATCTCTATGTGTT 3632 Query 159739 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCA 159798 || || || || || || ||||| || ||||| ||| | || ||| ||| | | ||| Sbjct 3631 CCTCACGGTGGAGGTGGGCCTGGAGTTGGTCCAATTTGCGTTAAAAAGCATTTGATTCCA 3572 Query 159799 TTT 159801 ||| Sbjct 3571 TTT 3569 Score = 100 bits (110), Expect = 3e-16 Identities = 178/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 |||||||| ||| || || | || || ||||| || || || ||||| || || ||||| Sbjct 4966 CAAAGGTTCGGTGTTTCTCTTGGTTATGGAGGACCCCACGCCGCATTTTTCGCTACAACT 4907 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || | ||||| || | || || | | |||||| || || || | ||||| Sbjct 4906 GATGCATTAAAGAGGAAAGTCCCAGGTCGTTTAGTAGGTGTATCTGTTGACACTAAAGGT 4847 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 | |||||| ||| | || || || || | || || |||||||||||||||||||| Sbjct 4846 CGAACAGCATATAGACTTGCCCTCCAAACCCGTGAACAACATATCAGAAGAGACAAAGCT 4787 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCA 158682 || |||||||| || || || || || | || |||||| ||| | || |||| Sbjct 4786 ACTTCAAACATCTGTACCGCTCAGGCCCTCTTAGCAAATATGGCTGCCATGTACGCAGTC 4727 Query 158683 TATCATGGTGCAGATGGACT 158702 || ||||| |||| || || Sbjct 4726 TACCATGGCCCAGAAGGTCT 4707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587994239890640