Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5042 127 4e-24 >seq5042 Length=7215 Score = 127 bits (140), Expect = 4e-24 Identities = 303/453 (67%), Gaps = 4/453 (1%) Strand=Plus/Minus Query 25583 ATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATC 25642 ||||| ||||| || | | || ||||| || ||| |||||||| || ||||| || | Sbjct 6123 ATTTTATCAAGAACATCCTCGCCTTCTTCGCTGCCAGCGATGGTATCGTCAACGAAAACC 6064 Query 25643 TGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCC 25702 | || | || | ||||| || | || ||| ||||| || ||||||| Sbjct 6063 TCGTCGCCAACTTTGGAACTGAAGTCCAAATCCCTGAAGCCCGCTGTTTTTATGGTTTCC 6004 Query 25703 AGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATT 25761 | || || ||||| | ||| ||| |||| ||| |||| | ||| || ||||| Sbjct 6003 AAATTATGATTGAAAACATCCACAGTGAAATGTACTCCATGCTTATTGAT-ACTTACATC 5945 Query 25762 ACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAG 25821 | ||| || || ||||| || | ||| | | |||| ||| |||| ||| Sbjct 5944 AAAGATAACGTTGAAAGAGACTTCCTACTCAACGCCGTTCAAAACATCCCCTGCATTAAG 5885 Query 25822 AGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGG 25881 | ||||| ||||| | ||||||| | | | | | |||||||| | Sbjct 5884 AAAAAGGCTAACTGGGCTCTTGAGTGGATTGATGACTCTAACAAAAGCTTTGGCGAAAGA 5825 Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 |||| || ||| || || || |||||||| ||||| || || ||||| ||||||||| Sbjct 5824 CTGGCTGCTTTTTGTGTCGTTGAAGGCATCTTCTTCAGTGGCTCTTTTGCCGCCATCTTC 5765 Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAG 26000 |||||||| || || ||||||||| || |||||| |||||||| || ||| | || Sbjct 5764 TGGCTCAAAAAGCGTGGCCTCATGCCCGGTCT-TACTTTCTCCAACGAACTTATCTGTAG 5706 Query 26001 GGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 ||||| ||||| |||| ||||||| |||||| Sbjct 5705 AGACGAAGGTCTTCACACCGATTTTGGCTGCCT 5673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928754829770560