Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2634 105 3e-18 >seq2634 Length=12318 Score = 105 bits (116), Expect = 3e-18 Identities = 304/468 (65%), Gaps = 0/468 (0%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 || |||||||| ||| ||| | |||| | ||| ||| || | || |||||| Sbjct 8331 GGGCAGAATAATGACCAGTCACCGTTTTCCAAAACGCGGCGCATGAAAAGGTCAGGAATC 8272 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | | || || || || | || | |||||||||| |||||||| ||| |||| Sbjct 8271 CAAAGACCGTAGAACAAGTCACGGGCACGATTTTCTTCTTTACCGTGATTTTTTCTTAGG 8212 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 | ||| || |||||||| || | ||||||||||| | || || || || ||| Sbjct 8211 TTTAAAAATTCAAAAATGTCGGCATGCCATGGTTCAAGGTAAATGGCGAAGGCGCCTGGA 8152 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 | ||| || ||||| || |||||||| || || ||||| |||| | ||||||| Sbjct 8151 CGTTTGTTGCCGCCTTGGTCGACGTATCTAGCGGTAGTGTTGAATACTTGGAGCATTGGA 8092 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 || | ||| | ||| || || || | || | || || || | | ||||| | Sbjct 8091 ACAATTCCGTTCGAAGTACCATTGGTTCCGGCGATGTAAGAGCCAGTTGCACGAATATTG 8032 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTA 26251 || | | ||| ||||||||||| |||| || || || || | || | ||| Sbjct 8031 TGGATACTTAGACCAATTCCACCAGCAGATTTAGAGATTTTAGCGCATTGGGAGATAGTA 7972 Query 26252 TCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGC 26311 || |||| |||| ||| ||| | | |||| || || || || ||| || || Sbjct 7971 TCATAAATACCTTCGATGGAGTCATCCTGCATTGTTAGCAAGAAGCAGGAACTTAGCTGA 7912 Query 26312 GAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAA 26359 | | || | ||||| || || || | ||| || | ||||||||| || Sbjct 7911 GGACGATTAGTTCCAGAGTTGAAAAGTGTAGGAGAGGCATGAGTAAAA 7864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253016102665175