Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq22 114 1e-20 >seq22 Length=60687 Score = 114 bits (126), Expect = 1e-20 Identities = 182/256 (71%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 |||||| | | ||| ||| || | ||| ||||| || ||||| || || || || || Sbjct 3569 AAATGGAATCAAATGCTTTTTAACGCAAATTGGACCAACTCCAGGCCCACCTCCACCGTG 3628 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATG 138279 |||| ||| | | ||||| ||| | ||| || ||||| || || ||| |||| || Sbjct 3629 AGGAACACATAGAGATTTATGGTTATTGATATGGCAAACATCAGCCCCCATA-TCACCTG 3687 Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 | || | || ||| | |||||||| | |||||||| || | ||| || ||||||||| Sbjct 3688 GGTTAGTTATACCGATTTGTGCATTCAAGTTTGCACCGTCCATATAAACTAGACCACCAT 3747 Query 138340 TGTCATGAACGATCTTACATATCTG-TCTGATGTTTGTTTCAAATACACCATGAGTCGAT 138398 | |||||||| ||||| || || | ||||| | ||| || | || | ||| ||| Sbjct 3748 TATCATGAACAATCTTTG-TAGCTTCTTTGATGCCTTCTTCGAAAATTCCGTAAGTGGAT 3806 Query 138399 GGATATGTAATCATAA 138414 || ||||||||||||| Sbjct 3807 GGGTATGTAATCATAA 3822 Score = 104 bits (114), Expect = 3e-17 Identities = 192/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 || || |||| ||||| || |||| || | ||| ||||||||| | || || || Sbjct 4707 AGACCTTCTGGGCCATGGTAGACTGCGTACATGGCAGCCATATTTGCTAAGAGGGCCTGA 4766 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || || |||||||| || |||||||||||||| ||||| || || | ||||| || Sbjct 4767 GCGGTACAGATGTTTGAAGTAGCTTTGTCTCTTCTGATATGTTGTTCACGGGTTTGGAGG 4826 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || | ||| ||||| | |||| |||| || || |||||| | | || || Sbjct 4827 GCAAGTCTATATGCTGTTCGACCTTTAGTGTCAACAGATACACCTACTAAACGACCTGGG 4886 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 | || ||||| | || ||||| || || ||||| || || || ||||| || || Sbjct 4887 ACTTTCCTCTTTAATGCATCAGTTGTAGCGAAAAATGCGGCGTGGGGTCCTCCATAACCA 4946 Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541 | || || ||| |||||||| | | || | | |||||||| Sbjct 4947 AGAGAAACACCGAACCTTTGAGAATTTCCAAGAACAATATCA 4988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578942316767480