Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2634 145 9e-30 >seq2634 Length=12318 Score = 145 bits (160), Expect = 9e-30 Identities = 621/972 (64%), Gaps = 32/972 (3%) Strand=Plus/Plus Query 75113 GATATTGATACGAAGCGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAG 75172 || ||||||| || || || | ||||| | |||||||| |||||||||| || | | Sbjct 7673 GAGATTGATAACAACCGTGATTTTGATTATAACTACTTTGGCTTCAAAACCCTCGAAAGG 7732 Query 75173 AGCTATCTTC--AACGGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGC 75230 || || | || | | || || | | || |||| ||||| ||| | |||||| Sbjct 7733 TCTTACCTCCTGAAAG--TTGACGGTAAAATTATTGAAAGACCACAATACCTTCTCATGC 7790 Query 75231 GGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGA 75290 | ||| || || ||||| || || || || | || | | |||||| || | Sbjct 7791 GCGTCAGCATTGGTATCCATGGCGATGATATCCAATCCGCTATCACTACATACCACCTCA 7850 Query 75291 TGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGAC 75350 |||| || | | || | ||| || | || || || ||||| |||| || | | Sbjct 7851 TGTCACAGCGCTTTTTTACTCATGCCTCTCCTACACTTTTCAACTCTGGAACTAATCGTC 7910 Query 75351 CGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA----GGAGGACTCAATCAACGGTATC 75406 | ||| | |||| || | || | || ||||| ||| ||||| ||| | ||||| Sbjct 7911 CTCAGCTA---AGTTCCTGC-TTCTTGCTAACAATGCAGGATGACTCCATCGAAGGTATT 7966 Query 75407 TATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCAC 75466 |||| ||| | | | || || ||||||| || | ||||| || ||||| | Sbjct 7967 TATGATACTATCTCCCAATGCGCTAAAATCTCTAAATCTGCTGGTGGAATTGGTCTAAGT 8026 Query 75467 ATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGT 75526 ||||| || | | || | | ||| || || || |||||| || | || Sbjct 8027 ATCCACAATATTCGTGCAACTGGCTCTTACATCGCCGGAACCAATGGTACTTCGAACGGA 8086 Query 75527 ATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGT 75586 ||| |||||||||| | ||||| ||| | || || | || || | |||| | ||| Sbjct 8087 ATTGTTCCAATGCTCCAAGTATTCAACACTACCGCTAGATACGTCGACCAAG-GCGGCAA 8145 Query 75587 CGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTT 75642 | | | || || |||| | ||| | ||||||||||||||||| || | || || Sbjct 8146 CAAACGTCCAGGCGCCTTCGCCATTTACCTTGAACCATGGCATGCCGACATTTTTGAATT 8205 Query 75643 CCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATC 75702 | | || || || || ||| | ||||| ||| | || | || | Sbjct 8206 TTTAAACCTAAGAAAAAATCACGGTAAAGAAGAAAATCGTGCCCGTGACTTGTTCTACGG 8265 Query 75703 CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTT 75762 || |||||||| |||||||||||| || ||| ||| ||| | ||||| | || Sbjct 8266 TCTTTGGATTCCTGACCTTTTCATGCGCCGCGTTTTGGAAAACGGTGACTGGTCATTATT 8325 Query 75763 CTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTA 75822 ||| || | | || || ||||| | |||| ||| ||| |||| || | ||||| Sbjct 8326 CTGCCCCCATGAAGCCCCTGGTCTAGCTGACGTTTGGGGCGAGAAGTTCGATGAACTCTA 8385 Query 75823 CACAAAGTATGAAGAG---GAGGGTAGA----GCCAATGCG--ACTGTACCAGCCGCCGA 75873 | ||| || ||| | || ||| || || || |||| ||||| | Sbjct 8386 CCTAAAATACGAAAACACTGAAGGTCTTCCTCGCAAACGCATCACTGC-CCAGCAAC--- 8441 Query 75874 TGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAA 75933 | ||| | |||||| | | || || | || |||||||| ||||| ||||| ||||| Sbjct 8442 --TCTGGTACGCTATTTTAGATTCCCAAATCGAAACTGGAACTCCATACATGCTCTACAA 8499 Query 75934 GGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCT 75993 || ||||||||| || ||||||| | || | |||||||| || |||||||| || Sbjct 8500 AGACGCTTGTAACGGCAAATCTAACCAACAAAACCTCGGAACAATTAAAAGCTCAAACCT 8559 Query 75994 TTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 |||||| ||||| | || ||||| ||||| || ||||||||||| || || || Sbjct 8560 TTGCACTGAAATCGTTGAATACACCTCCAAGGACGAAGTTGCTGTTTGCAACTTAGCCTC 8619 Query 76054 AATCGCCCTTCC 76065 || || ||||| Sbjct 8620 TATTGCTCTTCC 8631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596511814777120