Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq923 118 1e-21 >seq923 Length=21762 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| ||||| || || ||||| || || ||| ||| |||||||| || || Sbjct 10618 GTGGATTCTTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCGTCTTCGAGCTGTTTACCT 10677 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| ||||||| || |||||||| || ||||| ||||||||||| ||| || |||||| Sbjct 10678 GCGAAAATGAGACGTTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATTTTCTGCTTG 10737 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | || || || | ||||| || || || || |||||| Sbjct 10738 ACGTTGTCAATTGTGTCTGAAGATTCGACTTCAAGGGTGATAGTCTTACCTGTTAGAGTT 10797 Query 133644 TTTACGAAAATCTGCATG 133661 || |||||||| |||||| Sbjct 10798 TTGACGAAAATTTGCATG 10815 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 ||||||| || |||||||| || ||||| ||||||||||| ||| || ||||||| | Sbjct 10226 AAATGAGGCGTTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATTTTCTGCTTGACGT 10285 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | | || || || | ||||| ||| || || ||||||||||| | Sbjct 10286 TGTCAATTGTGTCCGAAGATTCGACTTCAAGGGTGATGGTCTTACCTGTCAGAGTTTTGA 10345 Query 133648 CGAAAATCTGCAT 133660 ||||||| ||||| Sbjct 10346 CGAAAATTTGCAT 10358 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| ||||| || || ||||| || | ||| ||| || ||||| || || Sbjct 10390 GTGGATTCTTTTTGGATGTTGTAGTCAGATAAAGTGCGGCCGTCTTCAAGCTGTTTACCT 10449 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| ||||||| || |||||||| || ||||| ||||||||||| || || |||||| Sbjct 10450 GCGAAAATGAGACGTTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGAATTTTCTGCTTG 10509 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | || || || | ||||| || || || || || || Sbjct 10510 ACGTTGTCAATTGTGTCTGAAGATTCGACTTCAAGGGTGATAGTCTTACCTGTAAGGGTC 10569 Query 133644 TTTACGAAAATCTGCAT 133660 ||||||||||| ||||| Sbjct 10570 TTTACGAAAATTTGCAT 10586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483373974652760