Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5042 93.3 1e-13 >seq5042 Length=7215 Score = 93.3 bits (102), Expect = 1e-13 Identities = 122/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 443697 AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGC 443756 ||||| | ||| |||| | |||||| ||| || ||||| | || || || ||| | Sbjct 5839 AGCTTTGGCGAAAGACTGGCTGCTTTTTGTGTCGTTGAAGGCATCTTCTTCAGTGGCT-C 5781 Query 443757 TTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAA 443816 ||| ||| ||||||||||| | ||||||||||| || |||| |||||| || || || Sbjct 5780 TTTTGCCGCCATCTTCTGGCTCAAAAAGCGTGGCCTCATGCCCGGTCTTACTTTCTCCAA 5721 Query 443817 CGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 |||||| ||| || | ||||| ||| | || ||| || | ||| || Sbjct 5720 CGAACTTATCTGTAGAGACGAAGGTCTTCACACCGATTTTGGCTGCCT 5673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588178303549305