Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5042 84.2 2e-11 >seq5042 Length=7215 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||| ||||| | || | ||| || || || | ||| || ||||| || |||||||| Sbjct 5697 CCTTCGTCTCTACAGATAAGTTCGTTGGAGAAAGTAAGACCGGGCATGAGGCCACGCTTT 5756 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGAC-ACACGCAAA 74887 || | ||| |||||||| || || |||||||||||||||||||| || |||| ||| Sbjct 5757 TTGAGCCAGAAGATGGCGGCAAAAGAGCCACTGAAGAAGATGCCTTCAACGACACAAAAA 5816 Query 74888 G 74888 | Sbjct 5817 G 5817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547162995290200