Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq729 102 9e-17 >seq729 Length=56091 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 139378 CGAGCCATTTCGAGCCCACGGTTTATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATG 139437 ||||| || |||| |||||||| || || | | | |||| | || ||||| || Sbjct 25965 CGAGCGATACCGAGACCACGGTTGATATCGTAAGTGTCATTGAGCGAAGGATCGTTGATA 26024 Query 139438 AAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACACGCATAACCAAAAGA 139497 | |||||||||||| ||||| |||||||| || ||||| ||| ||||||| | | || | Sbjct 26025 AGACCTTTCCAACCAACAGTGGTTCTTGGCTTTTCAAAGTAAGCACGCATGATGATAACA 26084 Query 139498 AGAT-----TTGGAAATTGTTTTTGTACTTCGGCTAAACGTTCGCCGTATTCGAGAGCAG 139552 || | ||| |||| || | | || | | | ||| ||||||| || |||| Sbjct 26085 AGCTCGTTCTTGTAAATCTTTGCGGCAGTT--ACAAGAAGTTTAGCGTATTCTAGGGCAG 26142 Query 139553 CTTTAGGGTCATGAATTGAACAAGGGCCTACAA 139585 ||||||||||||| || || ||||| || |||| Sbjct 26143 CTTTAGGGTCATGGATGGAGCAAGGACCAACAA 26175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568274550174120