Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq5539 131 1e-25 >seq5539 Length=6842 Score = 131 bits (144), Expect = 1e-25 Identities = 170/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 23594 ACAATTAATTAC----TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATC 23649 || || |||||| ||| |||||||||||| || || || || || || ||||| || Sbjct 1214 ACCATAAATTACGTTTTTAGAATGCAGATTTTTGTAAAGACTCTTACAGGTAAAACCATA 1155 Query 23650 ACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAA 23708 ||||| ||||| || || | || || |||| ||| ||||| |||||||| || || Sbjct 1154 ACTCTTGAAGTAGAATCTTCTGATTCTATTGAGAATGTTAAA-CAAAAAATCCAAGATAA 1096 Query 23709 AGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGA 23768 ||||| | || |||||||| || || || || || ||||| |||||||| ||||| | Sbjct 1095 GGAAGGAATTCCTCCAGATCAGCAACGCTTGATTTTCGCCGGTAAACAACTAGAAGATGG 1036 Query 23769 ACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || |||||||||||| |||||||| || || | || || ||| Sbjct 1035 CCGTACCTTGTCCGATTACAACATTCAAAAAGAATCTACTCTTCACTTGGTT 984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337977678056492