Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq356 89.7 4e-13 seq2250 87.8 2e-12 >seq356 Length=31527 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 |||||||| || ||||| ||||| | ||| |||||| |||||||||||||| || Sbjct 30990 AAGCAAAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAGCAAAGACTTATCTTCGCC 31049 Query 29100 GGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACT 29159 || || ||| |||||||| ||| | | || ||||| || |||||||||||||| Sbjct 31050 GGTAAGCAATTGGAAGATGGACGTACTCTTTCTGACTACAACATCCAGAAGGAATCTACC 31109 Query 29160 CTTCACATGGTGTT 29173 || ||| |||| || Sbjct 31110 CTCCACTTGGTTTT 31123 >seq2250 Length=3934 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| | || || | || || || || |||||| || ||| | | Sbjct 321 AATGCAGATTTTCGTTAAGACTCTAACTGGTAAGACAATTACCCTTGAGGTAGAATCTTC 262 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | || | ||||| || ||| ||||| ||||| | || ||| || Sbjct 261 TGACACTATTGACAATGTCAAGCAGAAGATTCAGGATAAGGAAGGAATCCCACCAGACCA 202 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || | ||||| || || || |||||||| |||||| | ||| | | |||||||| Sbjct 201 GCAGCGTCTTATTTTCGCTGGTAAACAACTTGAAGATGGCCGTACTTTATCTGATTACAA 142 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || ||||||||||||||||||||| |||| || || Sbjct 141 CATCCAGAAGGAATCTACTCTTCACTTGGTATTGCG 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428295296970035