Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq872 87.8 2e-12 >seq872 Length=30969 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | |||||| || ||||| || ||||| || | | Sbjct 26047 CCACCACGAAGACGGAGGACCAAATGAAGAGTGGATTCTTTTTGGATATTATAATCAGAC 26106 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | ||||||| ||| || || ||| | || | | ||||| || ||| Sbjct 26107 AAAGTACGGCCATCCTCCAACTGCTTACCGGCAAAGATCAAACGTTGCTGATCTGGGGGG 26166 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || ||| || || || || | ||| | ||| | ||| Sbjct 26167 ATTCCTTCCTTATCTTGGATTTTCTGCTTAACATTTTCGATGGAATCGGAAGACTCGACC 26226 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | |||||||||||| || |||| ||||||||||| || |||||| Sbjct 26227 TCGAGGGTAATGGTCTTACCAGTTAGTGTTTTGACAAAAATCTGCATT 26274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422219074423652