Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq872 122 1e-22 >seq872 Length=30969 Score = 122 bits (134), Expect = 1e-22 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 124535 TACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGC 124594 || |||||| || ||| | || |||||||| || || || || || | ||| | || | Sbjct 26277 TAGAATGCAGATTTTTGTCAAAACACTAACTGGTAAGACCATTACCCTCGAGGTCGAGTC 26218 Query 124595 AAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 ||| | || ||| | || |||||||| |||||||| ||||| || || || || Sbjct 26217 TTCCGATTCCATCGAAAATGTTAAGCAGAAAATCCAAGATAAGGAAGGAATCCCCCCAGA 26158 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714 ||| ||| | | || ||||| || || || || |||||| | || || || ||||| Sbjct 26157 TCAGCAACGTTTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGTACTTTGTCTGATTA 26098 Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||| ||||||||||| ||| | |||||||| | ||| | || |||||| Sbjct 26097 TAATATCCAAAAAGAATCCACTCTTCATTTGGTCCTCCGTCTTCGTGGTGGT 26046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755382371369600