Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq872 116 3e-21 seq356 113 4e-20 seq2250 104 2e-17 >seq872 Length=30969 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || || |||||||| || || ||||| || ||| || |||||| Sbjct 26065 ACCAAATGAAGAGTGGATTCTTTTTGGATATTATAATCAGACAAAGTACGGCCATCCTCC 26124 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| || || || |||| | ||| |||||||| || || || || ||||| ||| Sbjct 26125 AACTGCTTACCGGCAAAGATCAAACGTTGCTGATCTGGGGGGATTCCTTCCTTATCTTGG 26184 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || ||||| | ||||| || || | ||||||||||| ||| | || || Sbjct 26185 ATTTTCTGCTTAACATTTTCGATGGAATCGGAAGACTCGACCTCGAGGGTAATGGTCTTA 26244 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| |||||||||||||| Sbjct 26245 CCAGTTAGTGTTTTGACAAAAATCTGCAT 26273 >seq356 Length=31527 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | |||||| |||||||||| ||||| || || || |||||||| || Sbjct 31139 ACCACCACGGAGTCTCAAAACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGA 31080 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| || ||| || | || || || ||| |||| || | |||||||| || || Sbjct 31079 AAGAGTACGTCCATCTTCCAATTGCTTACCGGCGAAGATAAGTCTTTGCTGATCTGGGGG 31020 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || || ||||| || || | ||||| | || | ||| || Sbjct 31019 GATTCCTTCCTTATCCTGGATCTTTTGCTTGACGTTTTCGATAGAATCGGAAGACTCAAC 30960 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| ||| | || || ||||| | ||||| |||||||||||||||||| Sbjct 30959 CTCGAGGGTGATGGTCTTACCGGTTAAGGTTTTAACAAAAATCTGCATGGCT 30908 >seq2250 Length=3934 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| |||||||| | ||||| || || || ||||||||||| | ||| || ||| Sbjct 108 CAATACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTACGGCCATC 167 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || ||||| |||||| | || ||||||||||| || || || || || ||||| || Sbjct 168 TTCAAGTTGTTTACCAGCGAAAATAAGACGCTGCTGGTCTGGTGGGATTCCTTCCTTATC 227 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| || || || || | || | ||||| | || ||||| | ||| | || Sbjct 228 CTGAATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGATTCTACCTCAAGGGTAATTGT 287 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || ||||| || || ||||||||||| ||| Sbjct 288 CTTACCAGTTAGAGTCTTAACGAAAATCTGCATTGCT 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433789174859524