Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq265 147 2e-30 >seq265 Length=13576 Score = 147 bits (162), Expect = 2e-30 Identities = 565/863 (65%), Gaps = 27/863 (3%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 || || || ||||| || | || |||||||| || || ||||| | || || || | Sbjct 3996 TTCTGGTAATCACTGACGCGCTTCTCAAAGAAATTGGTCTTACCCTGCATGGAAATCATA 3937 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| || || ||||| || ||||| || || |||| || | || | | || Sbjct 3936 TCCATGAAGTCGAATGGGTTGATTGACTTATAATGCTTT-TCGAATCCCAAAGAGACTAA 3878 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 || | ||| || | |||||| |||||||| |||| | ||| |||||||| || || Sbjct 3877 CAAACGATCGGCTACGAACTCGATATATTGGCACATCAGGACACTGTTCATACCAATCAG 3818 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || | | ||||||||| |||| || || ||||| || | | || Sbjct 3817 AGAGCAGGGGAGGGAGTCGGTTAAAAACTCTTGCTCAATCACGACAGCATCAGTGACGAT 3758 Query 14152 A-ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATG---TTTAAAAATTAAACACG 14207 || | |||| |||| | | || | | || | | | ||| || | || || Sbjct 3757 GGATAG-AATAGTTTCCTG-GCTGG--GCTTGTTAACAAGGCATTTGAACAACAAGCAAC 3702 Query 14208 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 14267 |||| || || || ||||| |||| | ||| | |||||||||||||| ||||| | Sbjct 3701 CAAAGTCTGTGTGGAGTCCCTCGTCTCGGCAAATCAACTCGTTTGAAAATGTCAATCCGG 3642 Query 14268 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 14327 |||| | || || || || | |||||| || ||||| || || || ||||| |||| Sbjct 3641 GCATAAGACCACGCTTCTTGAGCCAAAAGATGGCAGCAAAAGACCCACTGAAGAAGATTC 3582 Query 14328 CCTCAACTGCAGCA-AACGCTATTAATCGTTCTCC-AAACGAT-GCTTTTTTGTTCGATA 14384 ||||||| | ||| || || |||| ||||| |||| | ||| | ||||| Sbjct 3581 CCTCAACAAC-GCAGAAGGCGGCCAATCTCTCTCCGAAACTTTTGCTGGAGTCATCGAT- 3524 Query 14385 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAA 14444 ||||| ||||| | || || ||||| ||| | || || | | || |||| Sbjct 3523 -CCATTCCAGTGCCCAATTAGCCTTCTTTTTGATACATGGGATATTTGCGACTGCGTTAA 3465 Query 14445 ATAA-ATGT-TC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14501 | | | || || || ||| ||| | |||| || | |||||||| | | |||| Sbjct 3464 AAAGGAAGTCTCTCTCCTCATTA-TCTTTGATAT--AGGTATCAATCAACATAGAGTACA 3408 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561 |||| ||| |||||||| || |||||| || ||||| ||||||||||| || | Sbjct 3407 TTTCGCTGTGGATGTTTTCTATCATTATCTGGAAGCCATAGAAACATCTAGCCTCAGGGA 3348 Query 14562 ATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14621 || || || | ||| | | |||||||||| || ||||| |||||||| |||| Sbjct 3347 TCTGGACTTCAGTTCCAAAGTTGGCAACCAAATTTTCGTTGACTATTCCATCACTGGCTG 3288 Query 14622 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTT--TTTTCCA 14679 | |||||||| | ||||| || ||||| || || | || | |||| |||||| Sbjct 3287 CGAAAAATGCAAGAATGTTCTTGATAAAAAATCTTTCGTTATCAGTTAGTTTATTTTCCC 3228 Query 14680 ATCGGCT--AAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCT 14737 | ||| |||| ||| | ||| ||||| || || ||||| || || || | || Sbjct 3227 A-GTGCTGGGTGTCCTGAGATAAATCAACTTCTTCGACAGTCCAGAAGCTGGCTTCGGCC 3169 Query 14738 TTTTTATACATTACCCATATTTC 14760 |||||||||||| ||| || || Sbjct 3168 TTTTTATACATTTGCCAAATCTC 3146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482298589391960