Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq265 125 1e-23 >seq265 Length=13576 Score = 125 bits (138), Expect = 1e-23 Identities = 279/413 (68%), Gaps = 7/413 (2%) Strand=Plus/Plus Query 101933 GTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGT 101992 ||||| ||||||||||| ||||| | || || |||| || ||| ||||||| | ||| Sbjct 3575 GTTGAGGGAATCTTCTTCAGTGGGTCTTTTGCTGCCATCTTTTGGCTCAAGAAGCGTGGT 3634 Query 101993 ATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGC 102052 || |||| || | || | || || ||||| |||| | ||||| || || || Sbjct 3635 CTTATGCCCGGATTGACATTTTCAAACGAGTTGATTTGCCGAGACGAGGGACTCCACACA 3694 Query 102053 GACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA-TACCCCATCAAGAGAAAGGAT 102111 ||||||| ||| || |||| ||| | ||||| | | |||| | || |||| || Sbjct 3695 GACTTTGGTTGCTTGTTGTTCAAA---TGCCTTGTTAACAAGCCCAGCCAG-GAAACTAT 3750 Query 102112 TCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCT-GC 102170 ||| || |||||||| || ||| ||||| ||||| ||| | || | ||||| | Sbjct 3751 TCTATCCATCGTCACTGATGCTGTCGTGATTGAGCAAGAGTTTTTAACCGACTCCCTCCC 3810 Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230 ||| | | | | || |||||| | ||||| |||| || || || || || || | Sbjct 3811 CTGCTCTCTGA-TTGGTATGAACAGTGTCCTGATGTGCCAATATATCGAGTTCGTAGCCG 3869 Query 102231 ATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCAT 102290 || | || || ||||| | |||||||| ||||| | |||||| ||| | Sbjct 3870 ATCGTTTGTTAGTCTCTTTGGGATTCGAAAAGCATTATAAGTCAATCAACCCATTCGACT 3929 Query 102291 TCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTC 102343 ||||||| | |||||| | || ||||||||| || ||||| ||| | ||| Sbjct 3930 TCATGGATATGATTTCCATGCAGGGTAAGACCAATTTCTTTGAGAAGCGCGTC 3982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989485141486135