Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq265 102 6e-17 >seq265 Length=13576 Score = 102 bits (112), Expect = 6e-17 Identities = 290/439 (66%), Gaps = 14/439 (3%) Strand=Plus/Plus Query 22750 GCCTT-TGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCT 22808 ||||| |||| |||||| || || | || |||||| ||||| ||||| || ||||| Sbjct 3563 GCCTTCTGCGT-TGTTGAGGGAATCTTCTTCAGTGGGTCTTTTGCTGCCATCTTTTGGCT 3621 Query 22809 GAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGA 22868 ||||| ||| || ||||| || ||| | ||||| |||||||||||| |||| ||||| Sbjct 3622 CAAGAAGCGTGGTCTTATGCCCGGATTGACATTTTCAAACGAGTTGATTTGCCGAGACGA 3681 Query 22869 AGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATG----GCAAACAAACCGT 22924 || || ||| ||||||| ||| || |||| |||||| | ||||| || Sbjct 3682 GGGACTCCACACAGACTTTGGTTGCTTGTTGTT----CAAATGCCTTGTTAACAAGCCCA 3737 Query 22925 GTCAGG--ACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTT 22982 | |||| || || | ||| ||| | ||||||| || | |||||| | || || Sbjct 3738 GCCAGGAAACTATTC-TATC-CATCGTCACTGATGCTGTCGTGATTGAGCAAGAGTTTTT 3795 Query 22983 CCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACAT 23042 || | || | || |||||||||| |||| | ||| | | || || Sbjct 3796 AACCGACTCCCTCCCCTGCTCTCTGATTGGTATGAACAGTGTCCTGATGTGCCAATATAT 3855 Query 23043 ACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGC 23102 |||| || || ||||| || | | | |||| | | |||| ||||| Sbjct 3856 CGAGTTCGTAGCCGATCGTTTGTTAGTCTCTTTGGGATTCGAAAAGCATTATAAGTCAAT 3915 Query 23103 CAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAACG 23162 ||| ||||| || |||||||||| ||| ||| | ||||| || || |||||||| Sbjct 3916 CAACCCATTCGACTTCATGGATATGATTTCCATGCAGGGTAAGACCAATTTCTTTGAGAA 3975 Query 23163 CCGTGTGAGTGAATATCAG 23181 || || ||||| || ||| Sbjct 3976 GCGCGTCAGTGATTACCAG 3994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356199748568191