Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq265 156 4e-33 >seq265 Length=13576 Score = 156 bits (172), Expect = 4e-33 Identities = 370/550 (67%), Gaps = 13/550 (2%) Strand=Plus/Minus Query 13887 TGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCT 13946 || || ||||| |||| | ||| | |||||||||||||| ||||| ||||| | || Sbjct 3690 TGGAGTCCCTCGTCTCGGCAAATCAACTCGTTTGAAAATGTCAATCCGGGCATAAGACCA 3631 Query 13947 CGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCA 14006 || || || | |||||| || |||||||| ||||| ||||| ||||||||||| | Sbjct 3630 CGCTTCTTGAGCCAAAAGATGGCAGCAAAAGACCCACTGAAGAAGATTCCCTCAACAAC- 3572 Query 14007 GCA-AACGCTATTAATCGTTCTCC-AAACGAT-GCTTTTTTGTTCGATATCCATTTTCTA 14063 ||| || || |||| ||||| |||| | ||| | ||||| ||||| Sbjct 3571 GCAGAAGGCGGCCAATCTCTCTCCGAAACTTTTGCTGGAGTCATCGAT--CCATTCCAGT 3514 Query 14064 GCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC 14123 ||||| | || || ||||| ||| | || || | | || ||||| | | || Sbjct 3513 GCCCAATTAGCCTTCTTTTTGATACATGGGATATTTGCGACTGCGTTAAAAAGGAAGTCT 3454 Query 14124 TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATG 14183 |||| | | || | || || |||||||| | | |||||||| ||| ||| Sbjct 3453 CTCTCCTCATTATCTTTGATATAGGTATCAATCAACATAGAGTACATTTCGCTGTGGATG 3394 Query 14184 TTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAG 14243 ||||| || |||||| || ||||| || |||||||| || | || ||||| | Sbjct 3393 TTTTCTATCATTATCTGGAAGCCATAGAAACATCTAGCCTCAGGGATCTGGACTTCAGTT 3334 Query 14244 TAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAAT 14303 ||| | | |||||||||| || ||||| |||||||| ||||| |||||||| | Sbjct 3333 CCAAAGTTGGCAACCAAATTTTCGTTGACTATTCCATCACTGGCTGCGAAAAATGCAAGA 3274 Query 14304 ATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT---CCAATC--GGATAAAT 14358 ||||| || ||||| || || | || | ||||| || ||| | || | | Sbjct 3273 ATGTTCTTGATAAAAAATCTTTCGTTATCAGTTAGTTTATTTTCCCAGTGCTGGGTG--T 3216 Query 14359 CCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTA 14418 ||| ||| | ||| ||||| || || ||||| || || || | || |||||||||||| Sbjct 3215 CCTGAGATAAATCAACTTCTTCGACAGTCCAGAAGCTGGCTTCGGCCTTTTTATACATTT 3156 Query 14419 CCCATATTTC 14428 ||| || || Sbjct 3155 GCCAAATCTC 3146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479681244509800