Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq265 140 3e-28 >seq265 Length=13576 Score = 140 bits (154), Expect = 3e-28 Identities = 372/554 (67%), Gaps = 21/554 (4%) Strand=Plus/Minus Query 13675 TGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCT 13734 || || ||||| |||| | ||| | |||||||||||||| ||||| ||||| | || Sbjct 3690 TGGAGTCCCTCGTCTCGGCAAATCAACTCGTTTGAAAATGTCAATCCGGGCATAAGACCA 3631 Query 13735 CGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCA 13794 || || || | |||||| || ||||| || || || ||||| ||||||||||| | Sbjct 3630 CGCTTCTTGAGCCAAAAGATGGCAGCAAAAGACCCACTGAAGAAGATTCCCTCAACAAC- 3572 Query 13795 GCA-AACGCTATTAGTCGTTCTCCAAACGATGCTTTT--TTGTTTGAT--ATCCATTTTC 13849 ||| || || | || ||||| || ||||| | | | || ||||||| Sbjct 3571 GCAGAAGGCGGCCAATCTCTCTCCGAAA----CTTTTGCTGGAGTCATCGATCCATTCCA 3516 Query 13850 TAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA-ATGT 13908 ||||| | || || ||||| ||| | || || ||| ||| || || | | || Sbjct 3515 GTGCCCAATTAGCCTTCTTTTTGATACATGGGATATTTGCGACTGCGTTAAAAAGGAAGT 3456 Query 13909 -TC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGT 13966 || || ||| ||| | |||| || | |||||||| | | |||||||| || Sbjct 3455 CTCTCTCCTCATTA-TCTTTGATAT--AGGTATCAATCAACATAGAGTACATTTCGCTGT 3399 Query 13967 GTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCT 14026 | ||||||||||| |||||| || ||||| ||||||||||| || | || || | Sbjct 3398 GGATGTTTTCTATCATTATCTGGAAGCCATAGAAACATCTAGCCTCAGGGATCTGGACTT 3339 Query 14027 CCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATG 14086 | | ||| | | |||| ||||| || || || |||||||| ||||| ||||||| Sbjct 3338 CAGTTCCAAAGTTGGCAACCAAATTTTCGTTGACTATTCCATCACTGGCTGCGAAAAATG 3279 Query 14087 CCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT--TTTTCCAATCGGCT-- 14142 | | ||||| || ||||| || || | || | |||| |||||| | ||| Sbjct 3278 CAAGAATGTTCTTGATAAAAAATCTTTCGTTATCAGTTAGTTTATTTTCCCA-GTGCTGG 3220 Query 14143 AAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATAC 14202 |||| ||| | ||| ||||| || || ||||| || || || | || ||||||||| Sbjct 3219 GTGTCCTGAGATAAATCAACTTCTTCGACAGTCCAGAAGCTGGCTTCGGCCTTTTTATAC 3160 Query 14203 ATTACCCATATTTC 14216 ||| ||| || || Sbjct 3159 ATTTGCCAAATCTC 3146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478542155539080