Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2250 96.9 4e-15 >seq2250 Length=3934 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| | |||||| || || |||| |||||||| || || ||||||||||| Sbjct 94 CCACCTCTAAGACGCAATACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAT 153 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| |||||||||||||| | || ||||| ||||| || || || Sbjct 154 AAAGTACGGCCATCTTCAAGTTGTTTACCAGCGAAAATAAGACGCTGCTGGTCTGGTGGG 213 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || ||| || || || | | || | ||||| | | |||||| Sbjct 214 ATTCCTTCCTTATCCTGAATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGATTCTACC 273 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 |||| || | ||||| || || | || || ||||| || ||||| ||| Sbjct 274 TCAAGGGTAATTGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCATTGCT 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506964985109040