Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq265 172 8e-38 >seq265 Length=13576 Score = 172 bits (190), Expect = 8e-38 Identities = 576/886 (65%), Gaps = 29/886 (3%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || || | || || || |||||| ||||||| |||||||| | ||| ||| Sbjct 3125 CTGTTCCCAATAAAGTGGCACGAGATTTGGCAAATGTATAAAAAGGCCGAAGCCAGCTTC 3184 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| |||||||| || ||| | || ||||| | | ||||| | | | ||| Sbjct 3185 TGGACTGTCGAAGAAGTTGATTTATCTCAGGACACCCAGCACTGGGAAAATAAACTAACT 3244 Query 125115 GAAACTGAGCGAGAGTTTATATC--GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAA 125172 || | || ||| ||| |||| | ||||| | || || || || | | ||||||| Sbjct 3245 GATAACGAA--AGATTTTTTATCAAGAACATTCTTGCATTTTTCGCAGCCAGTGATGGAA 3302 Query 125173 TCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG 125231 | |||||||| ||| || ||| || || | ||| | || || |||| Sbjct 3303 TAGTCAACGAAAATTTGGTTGCCAACTTTGGAACTGAAGTCCAG-ATCCCTGAGGCTAGA 3361 Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291 || || || || ||||| || ||||| || ||| | ||| ||||||||||||| || Sbjct 3362 TGTTTCTATGGCTTCCAGATAATGATAGAAAACATCCACAGCGAAATGTACTCTATGTTG 3421 Query 125292 ATTGACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACG 125351 ||||| | || || ||| | | | || | || ||||||||| ||| | Sbjct 3422 ATTGATACCTATATCAAAGATAATGAGGAGAGAGACTTCCTTTTTAACGCAGTCGCAAAT 3481 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACA----- 125406 | || | ||| || |||||| | |||| | |||||||||||| || Sbjct 3482 ATCCCATGTATCAAAAAGAAGGCTAATTGGGCACTGGAATGGATCGATGACTCCAGCAAA 3541 Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 ||| |||| | || ||| ||| || ||| || || ||||| |||||||| | Sbjct 3542 AGT-TTCGGA----GAGAGATTGGCCGCCTTCTGCGTTGTTGAGGGAATCTTCTTCAGTG 3596 Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526 | |||||| ||||||||||||||||||||||| || || ||||||||| |||| Sbjct 3597 GGTCTTTTGCTGCCATCTTTTGGCTCAAGAAGCGTGGTCTTATGCCCGGATTGACATTTT 3656 Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTC 125586 |||||||| || | ||||||||||| || ||| ||||||| | || |||| Sbjct 3657 CAAACGAGTTGATTTGCCGAGACGAGGGACTCCACACAGACTTTG-GTTGCT--TGTTGT 3713 Query 125587 GCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCG 125646 ||| | || | | || ||||| | |||| | | ||| || || | Sbjct 3714 TCAAATGCCTTGTTAACAAG------CCCAGCCAGGAAACTATTCTATCCATCGTCACTG 3767 Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706 |||| || ||| || ||||||||| ||||||| ||||| || | ||||||| | Sbjct 3768 ATGCTGTCGTGATTGAGCAAGAGTTTTTAACCGACTCCCTCCCCTGCTCTCTGATTGGTA 3827 Query 125707 TGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766 ||||| | || |||||| | || || ||||| || || |||||| | | | | Sbjct 3828 TGAACAGTGTCCTGATGTGCCAATATATCGAGTTCGTAGCCGATCGTTTGTTAGTCTCTT 3887 Query 125767 T--GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATC 125824 | |||| | ||| ||| || | | || || || || |||||| | || || Sbjct 3888 TGGGATT--CGAAAAGCATTATAAGTCAATCAACCCATTCGACTTCATGGATATGATTTC 3945 Query 125825 ACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | ||||||||||||| || || |||||| ||||| || ||| Sbjct 3946 CATGCAGGGTAAGACCAATTTCTTTGAGAAGCGCGTCAGTGATTAC 3991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740986974517720