Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq872 93.3 4e-14 >seq872 Length=30969 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || || || ||||| ||||| ||||| | || || | | ||||||| ||| ||||| Sbjct 26077 GTGGATTCTTTTTGGATATTATAATCAGACAAAGTACGGCCATCCTCCAACTGCTTACCG 26136 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| | || | | |||||||| ||| | || || || || |||||||| || Sbjct 26137 GCAAAGATCAAACGTTGCTGATCTGGGGGGATTCCTTCCTTATCTTGGATTTTCTGCTTA 26196 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | ||| | |||| || ||| |||| ||||||||| ||||| |||| ||| Sbjct 26197 ACATTTTCGATGGAATCGGAAGACTCGACCTCGAGGGTAATGGTCTTACCAGTTAGTGTT 26256 Query 19025 TTGACAAAAATTTGCATTTTAAAT 19048 ||||||||||| |||||| || || Sbjct 26257 TTGACAAAAATCTGCATTCTAGAT 26280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414533404831018