Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq872 84.2 1e-11 seq2250 82.4 5e-11 >seq872 Length=30969 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | || || |||||||| ||||| |||||||||||| | | || ||| Sbjct 26065 ACCAAATGAAGAGTGGATTCTTTTTGGATATTATAATCAGACAAAGTACGGCCATCCTCC 26124 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 || ||||| || ||| || ||||||||||| || | ||| || ||||| || || Sbjct 26125 AACTGCTTACCGGCAAAGATCAAACGTTGCTGATCTGGGGGGATTCCTTCCTTATCTTGG 26184 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || ||| || || ||| || | ||| | | || || || || || || || Sbjct 26185 ATTTTCTGCTTAACATTTTCGATGGAATCGGAAGACTCGACCTCGAGGGTAATGGTCTTA 26244 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || ||||| || ||||| ||||| Sbjct 26245 CCAGTTAGTGTTTTGACAAAAATCTGCAT 26273 >seq2250 Length=3934 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| | ||||| ||||| || | || || || || || || ||||||||||| Sbjct 93 ACCACCTCTAAGACGCAATACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGA 152 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || || | ||| || ||| || || | ||| |||||||| | || Sbjct 153 TAAAGTACGGCCATCTTCAAGTTGTTTACCAGCGAAAATAAGACGCTGCTGGTCTGGTGG 212 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| ||| || || | | ||| ||||| | || || Sbjct 213 GATTCCTTCCTTATCCTGAATCTTCTGCTTGACATTGTCAATAGTGTCAGAAGATTCTAC 272 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || || ||||| || |||||||| ||||| Sbjct 273 CTCAAGGGTAATTGTCTTACCAGTTAGAGTCTTAACGAAAATCTGCAT 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318747307859706