Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq356 91.5 1e-13 >seq356 Length=31527 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 ||||| ||||| || || |||||||| || || |||||||| || | ||| | Sbjct 31126 CTCAAAACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGTCCA 31067 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||||||||| || || || | ||||| || || ||||| ||| | ||||| || Sbjct 31066 TCTTCCAATTGCTTACCGGCGAAGATAAGTCTTTGCTGATCTGGGGGGATTCCTTCCTTA 31007 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || || ||||| || || | | | ||||||| || || || | ||| ||| Sbjct 31006 TCCTGGATCTTTTGCTTGACGTTTTCGATAGAATCGGAAGACTCAACCTCGAGGGTGATG 30947 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || ||||| || ||||| |||||||| ||||| Sbjct 30946 GTCTTACCGGTTAAGGTTTTAACAAAAATCTGCAT 30912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419547328332957