Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq1344 82.4 7e-11 >seq1344 Length=21310 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/143 (73%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 99651 GTAGATGTTCTGGAGGCTGGGCGGGATCGGAACGCCGCGG--TTCACGCTGAAGGCCAGG 99708 ||||||||| | || || | ||| | ||| | || | | ||||||||||| || || Sbjct 8098 GTAGATGTTTTTTAG--TGAGGGGGGTGGGACCACCCCTGGCTTCACGCTGAATGCGAGA 8041 Query 99709 CCGTGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGTCC 99768 ||||| ||||| || || ||||||| ||||||||||| | || |||||||| || || Sbjct 8040 CCGTGCGCCTGGCCCGGGTTGTGGTACGGGTCCTGGCCAATAATCACGACCTTCACATCA 7981 Query 99769 TCGGGCGCCGCGTAGCGCGTCCA 99791 ||| |||| |||| || ||| Sbjct 7980 TCGAATGCCGTGTAGGTCGACCA 7958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440856228861720