Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq265 134 1e-26 >seq265 Length=13576 Score = 134 bits (148), Expect = 1e-26 Identities = 212/301 (70%), Gaps = 7/301 (2%) Strand=Plus/Minus Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||| || || ||||||||| |||||| || || || |||||||| ||||| Sbjct 3411 TACATTTCGCTGTGGATGTTTTCTATCATTATCTGGAAGCCATAGAAACATCTAGCCTCA 3352 Query 21830 GAACATTGAACCTCGGAATAAAATCGTTG--AGCCAAGTTTTCATTTACTATTCCATCAC 21887 | || || || | ||| |||| | |||| ||||| || ||||||||||||| Sbjct 3351 GGGATCTGGACTTCAGTTCCAAA--GTTGGCAACCAAATTTTCGTTGACTATTCCATCAC 3294 Query 21888 TGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---T 21944 |||| || |||||||| | || || || |||||| ||| ||||||||| |||| | | Sbjct 3293 TGGCTGCGAAAAATGCAAGAATGTTCTTGATAAAAAATCTTTCGTTATCAGTTAGTTTAT 3234 Query 21945 TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAA 22004 ||| ||| | || | |||||||| |||||||| ||||| ||||| || Sbjct 3233 TTTCCCAGTGCTGGGTGTCCTGAGATAAATCAACTTCTTCGACAGTCCAGAAGCTGGCTT 3174 Query 22005 TAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGT 22064 |||||||||||||| ||| || || | | ||||||| || | || ||||||| Sbjct 3173 CGGCCTTTTTATACATTTGCCAAATCTCGTGCCACTTTATTGGGAACAGAACGAACCTGT 3114 Query 22065 T 22065 | Sbjct 3113 T 3113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531848959618280