Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq265 203 4e-47 >seq265 Length=13576 Score = 203 bits (224), Expect = 4e-47 Identities = 594/900 (66%), Gaps = 19/900 (2%) Strand=Plus/Minus Query 92824 TTTTCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAATTCACTA-GT-GATTGGATTC 92881 || ||||||||||| ||||| || | || || ||| || || | || || ||| || Sbjct 3975 TTCTCAAAGAAATTGGTCTTACCCTGCATGGAAATCATATCCATGAAGTCGAATGGGTTG 3916 Query 92882 TTGGCGTTATAATACTTTTCACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCT 92941 | | ||||||| |||||| ||| | || || | ||| ||||| || || Sbjct 3915 ATTGACTTATAATGCTTTTCGAATCCCAAAGAGACTAACAAACGATCGGCTACGAACTCG 3856 Query 92942 ATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACAGGT-AGAGCGTCGGT 93000 || || || |||||| ||| ||||| || | ||| | |||| || | |||||| Sbjct 3855 ATATATTGGCACATCAGGACACTGTTCATACCAATCAGA-GAGCAGGGGAGGGAGTCGGT 3797 Query 93001 CAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT--TACTCTACTATTT 93058 || || |||| ||| || || || || || | | ||| || || | | || | Sbjct 3796 TAAAAACTCTTGCTCAATCACGACAGCATCAGTGACGATGGATAGAATAGTTTCCTGGCT 3737 Query 93059 GGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCG 93118 || | || | | ||| ||| ||| ||||| ||||||| || || | || ||| Sbjct 3736 GGGCTTGTTAACAAGGCAT--TTGAACAACAAGCAACCAAAGTCTGTGTGGAGTCCCTCG 3679 Query 93119 TCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGC 93178 ||||| | |||||||| || ||||| || || || | || || || ||||||||| Sbjct 3678 TCTCGGCAAATCAACTCGTTTGAAAATGTCAATCCGGGCATAAGACCACGCTTCTTGAGC 3619 Query 93179 CAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCA-- 93236 ||||| || | ||||||| ||| || || || || || || | ||| | | | Sbjct 3618 CAAAAGATGGCAGCAAAAGACCCACTGAAGAAGATTCCCTCAACAAC-GCAGAAGGCGGC 3560 Query 93237 CAATACGT-TCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295 |||| | || | || ||||| | | | | |||||||| | ||||||| || Sbjct 3559 CAATCTCTCTCCGAAACTTTTGCTGGAGTCATC--GATCCATTCCAGTGCCCAATTAGCC 3502 Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAA 93355 || || || ||||| || | || ||| |||||||| ||| | |||| ||| || | Sbjct 3501 TTCTTTTTGATACATGGGATATTTGCGACTGCGTTAAAAAGGAAGTCTCTCTCCTCATTA 3442 Query 93356 TCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCA 93415 ||| || || ||||| || |||| ||| |||||||| |||| || || || Sbjct 3441 TCTTTGATATAGGTATCAATCAACATAGAGTACATTTCGCTGTGGATGTTTTCTATCATT 3382 Query 93416 ATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCT 93475 || ||||| || |||||||||||||| || | |||||| ||||| ||| | | Sbjct 3381 ATCTGGAAGCCATAGAAACATCTAGCCTCAGGGATCTGGACTTCAGTTCCAAAGTTGGCA 3322 Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA 93535 || | |||||| |||||||| ||||| ||||| ||||| || | || | ||| ||| Sbjct 3321 ACCAAATTTTCGTTGACTATTCCATCACTGGCTGCGAAAAATGCAAGAATGTTCTTGATA 3262 Query 93536 AAATGTTTCTCATCATCTTTAAGCTTA---TCCCAAT-CGGATAGATCTTTTGAAAGATC 93591 ||| | | || | ||| | || ||| ||||| | | | | || | || | ||| Sbjct 3261 AAAAATCTTTCGTTATCAGTTAGTTTATTTTCCCAGTGCTGGGTG-TCCTGAGATAAATC 3203 Query 93592 GACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTG 93651 ||||||||||||||||| || ||||| || ||||| ||||| | ||| || || || Sbjct 3202 AACTTCTTCGACAGTCCAGAAGCTGGCTTCGGCCTTTTTATACATTTGCCAAATCTCGTG 3143 Query 93652 ATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGTTG 93711 | | ||||| || | || || | || ||||| |||| ||| ||||| ||||| Sbjct 3142 CCACTTTATTGGGAACAGAACGAACCTGTTTGGGTTGGGCTTTAATAATGGCTCAAGTTG 3083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556806526954280