Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2250 98.7 1e-15 seq872 93.3 4e-14 >seq2250 Length=3934 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| || || ||||||||||| | | || || | |||||||| || Sbjct 118 TGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTACGGCCATCTTCAAGTTGT 177 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || |||| || ||||||||||| || || |||||||| || || || || || Sbjct 178 TTACCAGCGAAAATAAGACGCTGCTGGTCTGGTGGGATTCCTTCCTTATCCTGAATCTTC 237 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||| ||| || | || ||| | || || || | || | ||||| || || Sbjct 238 TGCTTGACATTGTCAATAGTGTCAGAAGATTCTACCTCAAGGGTAATTGTCTTACCAGTT 297 Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444 | ||| || |||||||| |||||| Sbjct 298 AGAGTCTTAACGAAAATCTGCATT 321 >seq872 Length=30969 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || ||||||||||| || || ||||| | | || || | || Sbjct 26062 AGGACCAAATGAAGAGTGGATTCTTTTTGGATATTATAATCAGACAAAGTACGGCCATCC 26121 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| |||||| | || | || ||||| || || || |||||||| || ||| Sbjct 26122 TCCAACTGCTTACCGGCAAAGATCAAACGTTGCTGATCTGGGGGGATTCCTTCCTTATCT 26181 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||||| ||| || | | ||| | || || || | || | |||| Sbjct 26182 TGGATTTTCTGCTTAACATTTTCGATGGAATCGGAAGACTCGACCTCGAGGGTAATGGTC 26241 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447 || || || | ||||| || ||||| |||||| || Sbjct 26242 TTACCAGTTAGTGTTTTGACAAAAATCTGCATTCTA 26277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499596103368680