Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq265 156 7e-33 >seq265 Length=13576 Score = 156 bits (172), Expect = 7e-33 Identities = 420/632 (66%), Gaps = 13/632 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| || || |||||||| |||| |||||| || |||||||| |||||||||| Sbjct 3976 CTTCTCAAAGAAATTGGTCTTACCCTGCATGGAAATCATATCCATGAAGTCGAATGGGTT 3917 Query 159709 C-TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 || || | ||| |||| ||||| | || | | ||| | || || || || | Sbjct 3916 GATTGACTT-ATAATGCTTTTCGAATCCCAAAGAGACTAACAAACGATCGGCTACGAACT 3858 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||| || |||||| | ||| ||| || || | ||| |||||| | || | Sbjct 3857 CGATATATTGGCACATCAGGACACTGTTCATACCAATCAGAGAGCAGGGGAGGGAGTCGG 3798 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT-CGTAC 159886 | |||||| | ||||||| |||| || || || || || | ||| ||| | | Sbjct 3797 TTAAAAACTCTTGCTCAATCACGACAGCATCAGTGACGATG-GATAGAATAGTTTCCTGG 3739 Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 | |||||| | || || || |||| | ||| ||||||| ||| |||||| Sbjct 3738 CTGGGCTTGTTAACAA---GGCATTTGAACAACAAGCAACCAAAGTCTGTGTGGAGTCCC 3682 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| || | || |||||||| || | | | || ||||| | |||||| ||| Sbjct 3681 TCGTCTCGGCAAATCAACTCGTTTGAAAATGTCAATCCGGGCATAAGACCACGCTTCTTG 3622 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCA-AACGC 160065 |||||||| ||||| ||||||| || || || ||||| ||||| || |||| || || Sbjct 3621 AGCCAAAAGATGGCAGCAAAAGACCCACTGAAGAAGATTCCCTCAAC-AACGCAGAAGGC 3563 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCA--CCTTTTGGCCCATTCA 160123 | | ||||| || ||| | ||| ||||| | |||| || | ||||| | | Sbjct 3562 GGCCAATCTCTCTCCGAAACTTTTGCTGGAGTCATCGATCCATTCCAGT--GCCCAATTA 3505 Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTC 160183 ||||||||| ||| || || || |||| |||||||| | ||| ||||| Sbjct 3504 GCCTTCTTTTTGATACATGGGATATTTGCGACTGCGTTAAAAAGGAAGTCTCTCTCCTCA 3445 Query 160184 ACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATG 160243 ||| ||||| ||| |||||| | | ||||||||||| ||| | ||||| || Sbjct 3444 TTATCTTTGATATAGGTATCAATCAACATAGAGTACATTTCGCTGTGGATGTTTTCTATC 3385 Query 160244 GCCATCTGAAAGTTGTAGAAATATGTCGCCTC 160275 ||||| ||| |||||| || | ||||| Sbjct 3384 ATTATCTGGAAGCCATAGAAACATCTAGCCTC 3353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795077702186320