Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq265 154 1e-32 >seq265 Length=13576 Score = 154 bits (170), Expect = 1e-32 Identities = 545/837 (65%), Gaps = 41/837 (5%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 |||||||| ||||| || || |||| || |||||| | ||| || || || |||||| Sbjct 3975 TTCTCAAAGAAATTGGTCTTACCCTGCATGGAAATCATATCCATGAAGTCGAATGGGTTG 3916 Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATC--AGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742 || || || ||||| | | ||| | ||| | || | ||||| ||||||| Sbjct 3915 ATTGACTTATAATGCTT--TTCGAATCCCAAAGAGACTAACAAACGATCGGCTACGAACT 3858 Query 132743 CGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTTCG 132801 |||| ||||| |||| | | || | || | |||| ||| || || | ||| Sbjct 3857 CGATATATTGGCACATCAGGACACTGTTCATACCAATCAGAGAGCAGGGG-AGGGAGTCG 3799 Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861 || | ||| |||||| || |||| || || |||||||| || || | Sbjct 3798 GTTAAAAACTCTTGCTCAATCACGACAGCATCAGTGACGATGGATAGAATAGTTTCCTGG 3739 Query 132862 CTCGGCCGTTGCACCAAATGC--TTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 || ||| | || || || ||||||| ||||||| ||||||| || | |||| Sbjct 3738 CTGGGCTTGTTAAC--AAGGCATTTGAACAACAAGCAACCAAAGTCTGTGTGGAGTCCCT 3681 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAA--GTCAAGCCGGGCATGAGGCCGCGTTTTTT 132977 |||| | | |||| | ||||| ||||| ||||| |||||||| || || || || || Sbjct 3680 CGTCTCGGCAAATCAACTCGTT--TGAAAATGTCAATCCGGGCATAAGACCACGCTTCTT 3623 Query 132978 GAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGC 133037 ||||||||| ||||| || ||| || ||||||| ||||| || | ||| || Sbjct 3622 GAGCCAAAAGATGGCAGCAAAAGACCCACTGAAGAAGATTCCCTCAACAACGCAGAAGGC 3563 Query 133038 CACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG------CGATCCAGCGCAGCGCCCA 133091 ||| | ||| ||||| | |||||||| ||||||| ||| ||||| Sbjct 3562 GGCCAATCTCTCTCCGAAACT------TTTGCTGGAGTCATCGATCCATTCCAGTGCCCA 3509 Query 133092 TTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTC 133151 | ||||| | ||||| || || || || ||| ||||| | ||| | ||| |||| Sbjct 3508 ATTAGCCTTCTTTTTGATACATGGGATATTTGCGACTGCGTT--AAAAAGGAAGTCTCTC 3451 Query 133152 TTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTC 133209 | | | | | | ||||| || || | | || |||||||| ||| | ||| Sbjct 3450 TCCTCATTATCTTTGATATAGGTATCAATCAACATAGAGTACATTTCGCTGTGGATGTTT 3391 Query 133210 TCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCG 133269 || || || || ||||| || || || | ||||| | ||| ||||| | | Sbjct 3390 TCTATCATTATCTGGAAGCCATAGAAACATCTAGCCTCAGGGATCTGGACTTC-AGTTCC 3332 Query 133270 AAACGCT--CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCA 133327 ||| | | | |||| |||||||||||| || || || ||||| |||||||| || || | Sbjct 3331 AAA-GTTGGCAACCAAATTTTCGTTGACTATTCCATCACTGGCTGCGAAAAATGCAAGAA 3273 Query 133328 CGTGCTTGATGAAATGGCGCTCGTTGTC-----GTTCAAGCGCTCCCAGTCGCGCGTGTC 133382 || |||||| ||| | ||||| || ||| | ||||||| | ||||| Sbjct 3272 TGTTCTTGATAAAAAATCTTTCGTTATCAGTTAGTTTA--TTTTCCCAGTGCTGGGTGTC 3215 Query 133383 CTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || || | || || || ||||| ||||| || || ||||| ||||| ||||| Sbjct 3214 CTGAGATAAATCAACTTCTTCGACAGTCCAGAAGCTGGCTTCGGCCTTTTTATACAT 3158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500124051908480