Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3671 89.7 6e-13 >seq3671 Length=8432 Score = 89.7 bits (98), Expect = 6e-13 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG 159609 ||||| || || || ||||| ||||| | |||||| | |||| | | | || Sbjct 1632 ATGATCACTTACCCTTCTACTTATGGTATTTTTGAAGAAGGAATCAAAGAAGCAATCCAG 1573 Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669 || || || || || || || || || || | ||||||||||| | ||||| || || Sbjct 1572 ATAGTCCACGACAACGGAGGCCAAGTTTACATGGATGGTGCAAACTTGAATGCCCAAATA 1513 Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729 || || | || ||| | ||| || |||||||| || || | ||| ||||| || Sbjct 1512 GGAATAACCAATCCAGGAGACATGGGAGCAGATGTTTGCCACATTAACAACCATAAATCA 1453 Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789 | || |||| |||||||| ||||| || || || ||||| ||| ||||| ||||| Sbjct 1452 CTATGCGTTCCTCATGGAGGAGGAGGACCCGGAGTTGGTCCAATTTGTGTAAAGAAACAC 1393 Query 159790 CT 159791 || Sbjct 1392 CT 1391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587993887059920